RNA–Protein interactions for RNA: ENST00000536287.2

RHBDL3-203, Transcript of rhomboid like 3, humanhuman

TSL 2 BASIC

Gene RHBDL3, Length 4,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-203ENST00000536287 CFAP73A6NFT4 308 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 EIF4E1BA6NMX2 242 aaKnown RBP12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 RAD51CO43502 376 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 KRT3P12035 628 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 ESRRGP62508 458 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 FBXL13Q8NEE6 735 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 ANKS1AQ92625 1134 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 SH2D3AQ9BRG2 576 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 PLAGL2Q9UPG8 496 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 E9PCH4 1651 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 TCP11X1B4DZS4 312 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 CYP26A1O43174 497 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 SRGAP2BP0DMP2 458 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 ERVK-24P63145 666 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 PDIA2Q13087 525 aaKnown RBP12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 SBK1Q52WX2 424 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 PODNQ7Z5L7 613 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 MORC4Q8TE76 937 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 TSC22D3Q99576 134 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 IPO11Q9UI26 975 aaKnown RBP12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 L1RE1Q9UN81 338 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 MYO3AQ8NEV4 1616 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 CALB1P05937 261 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 KRT76Q01546 638 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 CDR2Q01850 454 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 KRT17Q04695 432 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 EXOC8Q8IYI6 725 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 SNF8Q96H20 258 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 ERGIC2Q96RQ1 377 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 YIPF3Q9GZM5 350 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 SPC25Q9HBM1 224 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 CPS1P31327 1500 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 CEMIPQ8WUJ3 1361 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 SPAG7O75391 227 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 LMNAP02545 664 aaKnown RBP12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 SCP2P22307 547 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 ZNF543Q08ER8 600 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 KLHL38Q2WGJ6 581 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 CEP55Q53EZ4 464 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 MYLK4Q86YV6 388 aaPredicted RBP12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 ELOA2Q8IYF1 753 aaPredicted RBP12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 SLC35G2Q8TBE7 412 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 ECT2Q9H8V3 914 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 ATP6V0A4Q9HBG4 840 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 SLC24A3Q9HC58 644 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 SLC5A4Q9NY91 659 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 EHD2Q9NZN4 543 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 THEGQ9P2T0 379 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 MID2Q9UJV3 735 aa12.74□□□□□ -0.37
RHBDL3-203ENST00000536287 PLEKP08567 350 aaPredicted RBP12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 GNA15P30679 374 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 ARFIP2P53365 341 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 SATB1Q01826 763 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 MAPK6Q16659 721 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 STK33Q9BYT3 514 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 PFDN6O15212 129 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 NAB2Q15742 525 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 ANKRD20A4Q4UJ75 823 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 ANKRD20A8PQ5CZ79 823 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 ANKRD20A2Q5SQ80 823 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 ANKRD20A1Q5TYW2 823 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 SERPINI1Q99574 410 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 ADAM33Q9BZ11 813 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 SMYD3Q9H7B4 428 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 PTPRUQ92729 1446 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 CFAP69A5D8W1 941 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 STXBP3O00186 592 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 KCNQ2O43526 872 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 PPFIA2O75334 1257 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 GGPS1O95749 300 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 HSPA4LO95757 839 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 OATP04181 439 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 EPHB1P54762 984 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 EDRF1Q3B7T1 1238 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 MUM1L1Q5H9M0 696 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 MMGT1Q8N4V1 131 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 C9orf72Q96LT7 481 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 NUDCD1Q96RS6 583 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 REEP2Q9BRK0 252 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 APOBEC2Q9Y235 224 aaKnown RBP12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 DUSP10Q9Y6W6 482 aa12.73□□□□□ -0.37
RHBDL3-203ENST00000536287 AGTP01019 485 aa12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 HSPA9P38646 679 aaKnown RBP12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 MDM2Q00987 491 aaPredicted RBP12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 THOC5Q13769 683 aaKnown RBP12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 ZNF699Q32M78 642 aa12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 Q3C1V9 767 aa12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 C4orf50Q6ZRC1 276 aa12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 DPP9Q86TI2 863 aa12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 TTC1Q99614 292 aa12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 LACRTQ9GZZ8 138 aa12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 GABBR1Q9UBS5 961 aa12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 APEX2Q9UBZ4 518 aa12.72□□□□□ -0.37
RHBDL3-203ENST00000536287 KITP10721 976 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms