RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 C2orf40Q9H1Z8 148 aa14.95□□□□□ -0.02
RPAIN-205ENST00000536255 MINDY3Q9H8M7 445 aa14.95□□□□□ -0.02
RPAIN-205ENST00000536255 MAGEF1Q9HAY2 307 aa14.95□□□□□ -0.02
RPAIN-205ENST00000536255 GDPD2Q9HCC8 539 aa14.95□□□□□ -0.02
RPAIN-205ENST00000536255 AGPAT5Q9NUQ2 364 aa14.95□□□□□ -0.02
RPAIN-205ENST00000536255 KCNH3Q9ULD8 1083 aa14.95□□□□□ -0.02
RPAIN-205ENST00000536255 ODF2LQ9ULJ1 636 aa14.95□□□□□ -0.02
RPAIN-205ENST00000536255 MRPL42Q9Y6G3 142 aaKnown RBP14.95□□□□□ -0.02
RPAIN-205ENST00000536255 PHLPP2Q6ZVD8 1323 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 A0A0U1RQF3 1178 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 A0A1W2PQ27 194 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 A0A1W2PQ64 194 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 A0A1W2PQD8 194 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 FGFR1P11362 822 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 CTNNB1P35222 781 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 SMTNP53814 917 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 AMPD3Q01432 767 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 NCBP1Q09161 790 aaKnown RBP14.94□□□□□ -0.02
RPAIN-205ENST00000536255 NAALADL2Q58DX5 795 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 ECHDC2Q86YB7 292 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 IFNLR1Q8IU57 520 aaPredicted RBP14.94□□□□□ -0.02
RPAIN-205ENST00000536255 MICALL1Q8N3F8 863 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 DEPTORQ8TB45 409 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 LRRC15Q8TF66 581 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 PPM1EQ8WY54 764 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 TRAIPQ9BWF2 469 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 LMCD1Q9NZU5 365 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 LARSQ9P2J5 1176 aaKnown RBP14.94□□□□□ -0.02
RPAIN-205ENST00000536255 MYO9BQ13459 2157 aa14.94□□□□□ -0.02
RPAIN-205ENST00000536255 PRUNE2Q8WUY3 3088 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 A0A087X0B3 334 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 TBKBP1A7MCY6 615 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 C5orf67F2Z3F1 127 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 H3BNC9 293 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 INO80B-WBP1J3KQ70 363 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 POLR2DO15514 142 aaKnown RBP14.93□□□□□ -0.02
RPAIN-205ENST00000536255 HOXA2O43364 376 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 TBCAO75347 108 aaKnown RBP14.93□□□□□ -0.02
RPAIN-205ENST00000536255 ERLIN2O94905 339 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 FAM13AO94988 1023 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 BMPR1AP36894 532 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 EFNA5P52803 228 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 RAD51AP2Q09MP3 1159 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 CCDC85BQ15834 202 aaPredicted RBP14.93□□□□□ -0.02
RPAIN-205ENST00000536255 ARSHQ5FYA8 562 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 CDCA2Q69YH5 1023 aaPredicted RBP14.93□□□□□ -0.02
RPAIN-205ENST00000536255 TWF2Q6IBS0 349 aaKnown RBP14.93□□□□□ -0.02
RPAIN-205ENST00000536255 ZNF598Q86UK7 904 aaKnown RBP14.93□□□□□ -0.02
RPAIN-205ENST00000536255 CEP57L1Q8IYX8 460 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 RNF169Q8NCN4 708 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 SLC17A8Q8NDX2 589 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 DHX58Q96C10 678 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 C11orf84Q9BUA3 381 aaPredicted RBP14.93□□□□□ -0.02
RPAIN-205ENST00000536255 TNMDQ9H2S6 317 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 USP25Q9UHP3 1055 aa14.93□□□□□ -0.02
RPAIN-205ENST00000536255 TCHHQ07283 1943 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 CCDC169A6NNP5 214 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 H0YCG3 227 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 EOMESO95936 686 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 RB1P06400 928 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 SKIP12755 728 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 PLS3P13797 630 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 PFKFB1P16118 471 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 ATF7P17544 494 aaPredicted RBP14.92□□□□□ -0.02
RPAIN-205ENST00000536255 AXLP30530 894 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 HOXA11P31270 313 aaPredicted RBP14.92□□□□□ -0.02
RPAIN-205ENST00000536255 RAB27AP51159 221 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 PEX3P56589 373 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 MBTD1Q05BQ5 628 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 MAPK7Q13164 816 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 GPM6BQ13491 265 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 E2F4Q16254 413 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 ABI1Q8IZP0 508 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 BSNDQ8WZ55 320 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 MRPS27Q92552 414 aaKnown RBP14.92□□□□□ -0.02
RPAIN-205ENST00000536255 CCDC34Q96HJ3 373 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 PRIMPOLQ96LW4 560 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 REEP2Q9BRK0 252 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 PLVAPQ9BX97 442 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 TMEM117Q9H0C3 514 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 PARVGQ9HBI0 331 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 KMT5AQ9NQR1 393 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 RNF19AQ9NV58 838 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 PRMT7Q9NVM4 692 aaPredicted RBP14.92□□□□□ -0.02
RPAIN-205ENST00000536255 RALGAPA2Q2PPJ7 1873 aa14.92□□□□□ -0.02
RPAIN-205ENST00000536255 A0A1B0GVL5 298 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 TSPAN1O60635 241 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 SCP2P22307 547 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 SYKP43405 635 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 NPTX2P47972 431 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 GIT2Q14161 759 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 MAPK6Q16659 721 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 PTPROQ16827 1216 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 CLLU1OSQ5K130 101 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.91□□□□□ -0.02
RPAIN-205ENST00000536255 DAW1Q8N136 415 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 FSIP1Q8NA03 581 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 SPIRE2Q8WWL2 714 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 DDX12PQ92771 950 aa14.91□□□□□ -0.02
RPAIN-205ENST00000536255 MRPL38Q96DV4 380 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms