RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 GGCXP38435 758 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 RNASE9P60153 205 aaKnown RBP14.5□□□□□ -0.09
VPS33B-202ENST00000535906 SNRPFP62306 86 aaKnown RBP14.5□□□□□ -0.09
VPS33B-202ENST00000535906 SP2Q02086 613 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 SUPT20HL1Q3ZLR7 823 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 EPC2Q52LR7 807 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 LEKR1Q6ZMV7 388 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 CBWD2Q8IUF1 395 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 MAP4K3Q8IVH8 894 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 ATP6V0A1Q93050 837 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 NTPCRQ9BSD7 190 aaKnown RBP14.5□□□□□ -0.09
VPS33B-202ENST00000535906 KMT5AQ9NQR1 393 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 INTUQ9ULD6 942 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 LCTP09848 1927 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 ATP8B3O60423 1300 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 MAPK13O15264 365 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 RPS6KA5O75582 802 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 PSAPP07602 524 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 LMNB1P20700 586 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 ACTR2P61160 394 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 FSTL1Q12841 308 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.5□□□□□ -0.09
VPS33B-202ENST00000535906 GOLGA6L1Q8N7Z2 621 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 SLC17A8Q8NDX2 589 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 SAAL1Q96ER3 474 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 TMEM117Q9H0C3 514 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 NFASCO94856 1347 aa14.5□□□□□ -0.09
VPS33B-202ENST00000535906 A0A0A6YYK5 440 aaPredicted RBP14.49□□□□□ -0.09
VPS33B-202ENST00000535906 GOLGA6BA6NDN3 693 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 SPATA31C2B4DYI2 1134 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 P4HA2O15460 535 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 KIF4AO95239 1232 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 EPHB4P54760 987 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 CETN1Q12798 172 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 VGLL4Q14135 290 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 KIF22Q14807 665 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 RPS6KA1Q15418 735 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 SNRNP35Q16560 246 aaKnown RBP14.49□□□□□ -0.09
VPS33B-202ENST00000535906 IFI16Q16666 785 aaKnown RBP14.49□□□□□ -0.09
VPS33B-202ENST00000535906 SH3D19Q5HYK7 790 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 TREML2Q5T2D2 321 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 C8orf74Q6P047 294 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 SLC39A4Q6P5W5 647 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 ABHD15Q6UXT9 468 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 PALB2Q86YC2 1186 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 AFAP1L1Q8TED9 768 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 CNKSR2Q8WXI2 1034 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 KIFAP3Q92845 792 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 XPNPEP1Q9NQW7 623 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 PDLIM7Q9NR12 457 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 CWC15Q9P013 229 aaKnown RBP14.49□□□□□ -0.09
VPS33B-202ENST00000535906 EXOC7Q9UPT5 735 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 SNCAIPQ9Y6H5 919 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 ADGRA3Q8IWK6 1321 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 WDR90Q96KV7 1748 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 ARID2Q68CP9 1835 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 TULP1O00294 542 aaPredicted RBP14.49□□□□□ -0.09
VPS33B-202ENST00000535906 KCNK3O14649 394 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 RFX1P22670 979 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 PRKCEQ02156 737 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 CNTN2Q02246 1040 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 EMBQ6PCB8 327 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 SND1Q7KZF4 910 aaKnown RBP eCLIP14.49□□□□□ -0.09
VPS33B-202ENST00000535906 RIN2Q8WYP3 895 aaPredicted RBP14.49□□□□□ -0.09
VPS33B-202ENST00000535906 CDHR1Q96JP9 859 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 OSGEPQ9NPF4 335 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.49□□□□□ -0.092e-11■■■■■ 173.1
VPS33B-202ENST00000535906 TAS2R14Q9NYV8 317 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 SEPT9Q9UHD8 586 aaPredicted RBP14.49□□□□□ -0.09
VPS33B-202ENST00000535906 DAAM1Q9Y4D1 1078 aa14.49□□□□□ -0.09
VPS33B-202ENST00000535906 STAM2O75886 525 aa14.48□□□□□ -0.09
VPS33B-202ENST00000535906 CCDC172P0C7W6 258 aa14.48□□□□□ -0.09
VPS33B-202ENST00000535906 MXI1P50539 228 aa14.48□□□□□ -0.09
VPS33B-202ENST00000535906 GNPTABQ3T906 1256 aa14.48□□□□□ -0.09
VPS33B-202ENST00000535906 SLFN11Q7Z7L1 901 aa14.48□□□□□ -0.09
VPS33B-202ENST00000535906 MYPNQ86TC9 1320 aa14.48□□□□□ -0.09
VPS33B-202ENST00000535906 ZNF526Q8TF50 670 aaPredicted RBP14.48□□□□□ -0.09
VPS33B-202ENST00000535906 SPIRE2Q8WWL2 714 aa14.48□□□□□ -0.09
VPS33B-202ENST00000535906 KAT5Q92993 513 aa14.48□□□□□ -0.09
VPS33B-202ENST00000535906 POP1Q99575 1024 aaKnown RBP14.48□□□□□ -0.09
VPS33B-202ENST00000535906 CYP26B1Q9NR63 512 aa14.48□□□□□ -0.09
VPS33B-202ENST00000535906 IGSF9BQ9UPX0 1349 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 DGAT1O75907 488 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 ZBTB48P10074 688 aaPredicted RBP14.47□□□□□ -0.09
VPS33B-202ENST00000535906 ABCB4P21439 1286 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 TNFAIP3P21580 790 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 MCCD1P59942 119 aaPredicted RBP14.47□□□□□ -0.09
VPS33B-202ENST00000535906 MAP2K1Q02750 393 aaPredicted RBP14.47□□□□□ -0.09
VPS33B-202ENST00000535906 FMNL3Q8IVF7 1028 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 SLC35G2Q8TBE7 412 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 SLC20A1Q8WUM9 679 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 TAF4BQ92750 862 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 CAVIN3Q969G5 261 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 CCDC127Q96BQ5 260 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 HVCN1Q96D96 273 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 C17orf75Q9HAS0 396 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 MYH9P35579 1960 aaKnown RBP14.47□□□□□ -0.09
VPS33B-202ENST00000535906 DKC1O60832 514 aaKnown RBP eCLIP14.47□□□□□ -0.09
VPS33B-202ENST00000535906 IVLP07476 585 aa14.47□□□□□ -0.09
VPS33B-202ENST00000535906 CYFIP1Q7L576 1253 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms