RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 GTF2IRD1Q9UHL9 959 aa25.09■■□□□ 1.61
RBFOX1-206ENST00000535565 PES1O00541 588 aaKnown RBP25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 TREHO43280 583 aa25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 EXOC3O60645 756 aa25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 PIGRP01833 764 aa25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 PSMC2P35998 433 aaKnown RBP25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 ACLYP53396 1101 aa25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 MAN2A1Q16706 1144 aa25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 FAM47CQ5HY64 1035 aa25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 ZNF410Q86VK4 478 aa25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 NLRP7Q8WX94 980 aa25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 CCDC113Q9H0I3 377 aa25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 FAM49AQ9H0Q0 323 aaPredicted RBP25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 ARMCX3Q9UH62 379 aaPredicted RBP25.08■■□□□ 1.61
RBFOX1-206ENST00000535565 TISP43B9A030 160 aa25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 ANKRD63C9JTQ0 380 aa25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 AKAP3O75969 853 aa25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 PRKCBP05771 671 aa25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 IFNLR1Q8IU57 520 aaPredicted RBP25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 XXYLT1Q8NBI6 393 aa25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 VTI1AQ96AJ9 217 aa25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 CBWD1Q9BRT8 395 aa25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 MRPL4Q9BYD3 311 aaKnown RBP25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 UNC93B1Q9H1C4 597 aa25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 HSPBP1Q9NZL4 362 aa25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 HTTP42858 3142 aa25.07■■□□□ 1.6
RBFOX1-206ENST00000535565 A0A087WZ62 844 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 LGALS16A8MUM7 142 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 GOLGA6L6A8MZA4 724 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 INO80B-WBP1J3KQ70 363 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 HSPA8P11142 646 aaKnown RBP25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 GARTP22102 1010 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 GPC3P51654 580 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 NLRP11P59045 1033 aaKnown RBP25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 HIC1Q14526 733 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 SLFN12LQ6IEE8 588 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 TAF2Q6P1X5 1199 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 ZPBP2Q6X784 338 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 CTU1Q7Z7A3 348 aaKnown RBP25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 SESTD1Q86VW0 696 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 FAM186BQ8IYM0 893 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 ZNF710Q8N1W2 664 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 POMGNT1Q8WZA1 660 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 ZNF668Q96K58 619 aaPredicted RBP25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 FDXACB1Q9BRP7 624 aaPredicted RBP25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 INO80BQ9C086 356 aaPredicted RBP25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 PCIF1Q9H4Z3 704 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 IFT122Q9HBG6 1241 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 INTS13Q9NVM9 706 aa25.06■■□□□ 1.6
RBFOX1-206ENST00000535565 CASP4P49662 377 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 ZNF200P98182 395 aaPredicted RBP25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 HSP90AA2PQ14568 343 aaPredicted RBP25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 RUFY4Q6ZNE9 571 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 NME8Q8N427 588 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 SPC24Q8NBT2 197 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 GLT1D1Q96MS3 346 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 PPP1R16BQ96T49 567 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 PRMT7Q9NVM4 692 aaPredicted RBP25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 KIAA0391O15091 583 aaKnown RBP25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 PTMAP06454 111 aaKnown RBP25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 CENPFP49454 3210 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 UBXN1Q04323 297 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 MBTD1Q05BQ5 628 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 PPP2R3AQ06190 1150 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 VWA3BQ502W6 1294 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 SLC39A4Q6P5W5 647 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 TRIM59Q8IWR1 403 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 DNAJB3Q8WWF6 145 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 FZD8Q9H461 694 aa25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 PAK6Q9NQU5 681 aaPredicted RBP25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.05■■□□□ 1.6
RBFOX1-206ENST00000535565 KBTBD13C9JR72 458 aa25.04■■□□□ 1.6
RBFOX1-206ENST00000535565 ACKR2O00590 384 aa25.04■■□□□ 1.6
RBFOX1-206ENST00000535565 RPLP2P05387 115 aaKnown RBP25.04■■□□□ 1.6
RBFOX1-206ENST00000535565 ADSSP30520 456 aa25.04■■□□□ 1.6
RBFOX1-206ENST00000535565 MIIPQ5JXC2 388 aa25.04■■□□□ 1.6
RBFOX1-206ENST00000535565 FKBP15Q5T1M5 1219 aa25.04■■□□□ 1.6
RBFOX1-206ENST00000535565 SRGAP1Q7Z6B7 1085 aa25.04■■□□□ 1.6
RBFOX1-206ENST00000535565 VSTM4Q8IW00 320 aa25.04■■□□□ 1.6
RBFOX1-206ENST00000535565 TARS2Q9BW92 718 aaKnown RBP25.04■■□□□ 1.6
RBFOX1-206ENST00000535565 MAPK13O15264 365 aa25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 TEX33O43247 280 aa25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 MATR3P43243 847 aaKnown RBP eCLIP25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 PTPN11Q06124 597 aaPredicted RBP25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 PRPF4BQ13523 1007 aaKnown RBP25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 ITGA7Q13683 1181 aa25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 FAM187BQ17R55 369 aa25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 GDF6Q6KF10 455 aaPredicted RBP25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 TMC6Q7Z403 805 aa25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 PRIMPOLQ96LW4 560 aa25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 GCOM2Q9BZD3 368 aaPredicted RBP25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 NDST4Q9H3R1 872 aa25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 STYXL1Q9Y6J8 313 aa25.03■■□□□ 1.6
RBFOX1-206ENST00000535565 CEP350Q5VT06 3117 aa25.02■■□□□ 1.6
RBFOX1-206ENST00000535565 CCL5P13501 91 aa25.02■■□□□ 1.6
RBFOX1-206ENST00000535565 TMEM132AQ24JP5 1023 aa25.02■■□□□ 1.6
RBFOX1-206ENST00000535565 KIZQ2M2Z5 673 aa25.02■■□□□ 1.6
RBFOX1-206ENST00000535565 RSPH3Q86UC2 560 aa25.02■■□□□ 1.6
RBFOX1-206ENST00000535565 RNF208Q9H0X6 261 aa25.02■■□□□ 1.6
RBFOX1-206ENST00000535565 MINDY3Q9H8M7 445 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms