RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ROR2Q01974 943 aaKnown RBP9.75□□□□□ -0.85
SF3B2-216ENST00000534765 COASYQ13057 564 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 GIT2Q14161 759 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 COG2Q14746 738 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 Q3C1V9 767 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 TUBB8Q3ZCM7 444 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 TCP11X2Q5H9J9 407 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 PPP1R15BQ5SWA1 713 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 KLHL7Q8IXQ5 586 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 OR2W6PQ8NHA6 318 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 MGARPQ8TDB4 240 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 GORASP1Q9BQQ3 440 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 REEP2Q9BRK0 252 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 LRRC1Q9BTT6 524 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 KCNH7Q9NS40 1196 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 RWDD2AQ9UIY3 292 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 TMEM110-MUSTN1A8MSY1 372 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 RASSF9O75901 435 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 POLR2MP0CAP2 368 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 MYBP10242 640 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 PAK1Q13153 545 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 AP3B2Q13367 1082 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 BAATQ14032 418 aaPredicted RBP9.75□□□□□ -0.85
SF3B2-216ENST00000534765 PGM5Q15124 567 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 KANK3Q6NY19 840 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 ANKRD13CQ8N6S4 541 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 CCDC197Q8NCU1 140 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 SLC5A5Q92911 643 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 SEC16BQ96JE7 1060 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 KRT86O43790 486 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 LRRN2O75325 713 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 CNMDO75829 334 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 MDH1P40925 334 aaKnown RBP9.75□□□□□ -0.85
SF3B2-216ENST00000534765 KRT71Q3SY84 523 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 OLFML2BQ68BL8 750 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 LRRC55Q6ZSA7 311 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 NELFCDQ8IXH7 590 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 DAW1Q8N136 415 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 OR8K1Q8NGG5 319 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 UHMK1Q8TAS1 419 aaKnown RBP9.75□□□□□ -0.85
SF3B2-216ENST00000534765 ZNF507Q8TCN5 953 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 HDAC7Q8WUI4 952 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 SCFD1Q8WVM8 642 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 ELAC2Q9BQ52 826 aaKnown RBP9.75□□□□□ -0.85
SF3B2-216ENST00000534765 BHMT2Q9H2M3 363 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 ARID2Q68CP9 1835 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 MKRN3Q13064 507 aaKnown RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 TNFAIP1Q13829 316 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 SPA17Q15506 151 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 TSNAXIP1Q2TAA8 658 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 ZCWPW2Q504Y3 356 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 ZC2HC1CQ53FD0 456 aaPredicted RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 TTMPQ5BVD1 217 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 ANKRD20A8PQ5CZ79 823 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 CATSPERGQ6ZRH7 1159 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 CNGA4Q8IV77 575 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 SLC17A8Q8NDX2 589 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 EPB41L5Q9HCM4 733 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 KCND1Q9NSA2 647 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 UBAP1Q9NZ09 502 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 SYNPO2Q9UMS6 1093 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 CHMP2BQ9UQN3 213 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 ZMYM2Q9UBW7 1377 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 ZNFX1Q9P2E3 1918 aaKnown RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 KCNJ18B7U540 433 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 MAGEA10P43363 369 aaPredicted RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 ELF3P78545 371 aaPredicted RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 KCNJ12Q14500 433 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 CEP55Q53EZ4 464 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 CHURC1Q8WUH1 139 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 OTUD5Q96G74 571 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 RBM41Q96IZ5 413 aaKnown RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 DDX23Q9BUQ8 820 aaKnown RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 EHD2Q9NZN4 543 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 STIM2Q9P246 746 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 DMGDHQ9UI17 866 aaKnown RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 NOVA2Q9UNW9 492 aaKnown RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 GRIN2DO15399 1336 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 DPPA5A6NC42 116 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 SPDYE5A6NIY4 337 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 B4DLN1 442 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 SERPINB4P48594 390 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 AARSP49588 968 aaKnown RBP eCLIP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 PAK2Q13177 524 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 SNRNP48Q6IEG0 339 aaKnown RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 TMEM110Q86TL2 294 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 FAM228AQ86W67 206 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 RNF10Q8N5U6 811 aaKnown RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 TSEN2Q8NCE0 465 aaKnown RBP9.74□□□□□ -0.85
SF3B2-216ENST00000534765 CDCA5Q96FF9 252 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 FAM84AQ96KN4 292 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 TRIM31Q9BZY9 425 aa9.74□□□□□ -0.85
SF3B2-216ENST00000534765 LRRC10BA6NIK2 292 aa9.73□□□□□ -0.85
SF3B2-216ENST00000534765 FAM107AO95990 144 aa9.73□□□□□ -0.85
SF3B2-216ENST00000534765 DSG3P32926 999 aa9.73□□□□□ -0.85
SF3B2-216ENST00000534765 ERFP50548 548 aa9.73□□□□□ -0.85
SF3B2-216ENST00000534765 ERVK-24P63145 666 aa9.73□□□□□ -0.85
SF3B2-216ENST00000534765 MPP3Q13368 585 aa9.73□□□□□ -0.85
SF3B2-216ENST00000534765 TKFCQ3LXA3 575 aa9.73□□□□□ -0.85
SF3B2-216ENST00000534765 MAP1SQ66K74 1059 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms