RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 LXNQ9BS40 222 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 NIFKQ9BYG3 293 aaKnown RBP9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 TMX1Q9H3N1 280 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 TTC12Q9H892 705 aaPredicted RBP9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 ERVK-5Q9HDB9 667 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 SUCLA2Q9P2R7 463 aaPredicted RBP9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 WRAP73Q9P2S5 460 aaPredicted RBP9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 PCDHB7Q9Y5E2 793 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 MTCH2Q9Y6C9 303 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 SQORQ9Y6N5 450 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 KDM3AQ9Y4C1 1321 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 LOXHD1Q8IVV2 1947 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 DKC1O60832 514 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 STBD1O95210 358 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 BRD1O95696 1058 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 STAG3L1P0CL83 205 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 ZSCAN20P17040 1043 aaPredicted RBP9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 YWHABP31946 246 aaKnown RBP9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 GPM6BQ13491 265 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 EPC2Q52LR7 807 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 EP400NLQ6ZTU2 488 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 OTUD6AQ7L8S5 288 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 ANKMY2Q8IV38 441 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 FBXO18Q8NFZ0 1043 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 SLC7A3Q8WY07 619 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 TMEM143Q96AN5 459 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 TMX3Q96JJ7 454 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 NLRP4Q96MN2 994 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 KCTD15Q96SI1 283 aaPredicted RBP9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 EIF2AK1Q9BQI3 630 aaKnown RBP9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 TMEM60Q9H2L4 133 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 ADAMTS10Q9H324 1103 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 CYP26B1Q9NR63 512 aa9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 DNAAF2Q9NVR5 837 aaKnown RBP9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 NOL7Q9UMY1 257 aaKnown RBP9.98□□□□□ -0.81
CCDC90B-219ENST00000534753 A0A087WZ62 844 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 TBKBP1A7MCY6 615 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 H3BQV1 296 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 LPXNO60711 386 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 MAFO75444 373 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 DGKIO75912 1065 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 SRGAP2CP0DJJ0 459 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 EIF4BP23588 611 aaKnown RBP9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 GJB2P29033 226 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 TECP42680 631 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 SARSP49591 514 aaKnown RBP9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 GPC3P51654 580 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 TARBP2Q15633 366 aaKnown RBP9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 LONRF3Q496Y0 759 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 INTS6LQ5JSJ4 861 aaKnown RBP9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 TTC38Q5R3I4 469 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 MAEAQ7L5Y9 396 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 VASH1Q7L8A9 365 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 NPAS4Q8IUM7 802 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 NOSTRINQ8IVI9 506 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 LINC01465Q8N7H1 131 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 TBC1D32Q96NH3 1257 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 FDXACB1Q9BRP7 624 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 GCOM2Q9BZD3 368 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 FOXP1Q9H334 677 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 ZSWIM4Q9H7M6 989 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 SMC3Q9UQE7 1217 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 KIF3AQ9Y496 699 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 ADGRA3Q8IWK6 1321 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 WDR81Q562E7 1941 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 CDH23Q9H251 3354 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 MYO9BQ13459 2157 aa9.97□□□□□ -0.81
CCDC90B-219ENST00000534753 COL4A4P53420 1690 aaPredicted RBP9.96□□□□□ -0.81
CCDC90B-219ENST00000534753 EYSQ5T1H1 3165 aa9.96□□□□□ -0.81
CCDC90B-219ENST00000534753 LZTS3O60299 673 aaPredicted RBP9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 SLITRK3O94933 977 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 FGFR1P11362 822 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 DARSP14868 501 aaKnown RBP9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 SCTRP47872 440 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 WNT7BP56706 349 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 TFF2Q03403 129 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 SPIRE1Q08AE8 756 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 EMC2Q15006 297 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 FAM102BQ5T8I3 360 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 SLC24A5Q71RS6 500 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 C4orf19Q8IY42 314 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 FAM200AQ8TCP9 573 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 PIGOQ8TEQ8 1089 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 PRPF31Q8WWY3 499 aaKnown RBP9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 JPH2Q9BR39 696 aaPredicted RBP9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 ATP6V0A4Q9HBG4 840 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 RGS18Q9NS28 235 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 CHD7Q9P2D1 2997 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 THEGQ9P2T0 379 aa9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 MRPL42Q9Y6G3 142 aaKnown RBP9.96□□□□□ -0.82
CCDC90B-219ENST00000534753 DKK1O94907 266 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 OR52Z1P0C646 297 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 VARSP26640 1264 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 BMPR1AP36894 532 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 PTPROQ16827 1216 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 TWF2Q6IBS0 349 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 CATSPER4Q7RTX7 472 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 ABI1Q8IZP0 508 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 EHBP1Q8NDI1 1231 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms