RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 PRPF31Q8WWY3 499 aaKnown RBP15.54■□□□□ 0.08
CCDC84-208ENST00000534656 ACSF2Q96CM8 615 aaPredicted RBP15.54■□□□□ 0.08
CCDC84-208ENST00000534656 CEP170P1Q96L14 293 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 FAM20AQ96MK3 541 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 KLHL5Q96PQ7 755 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 EMILIN2Q9BXX0 1053 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 DHX33Q9H6R0 707 aaKnown RBP15.54■□□□□ 0.08
CCDC84-208ENST00000534656 MINDY3Q9H8M7 445 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 SFXN1Q9H9B4 322 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 RSAD1Q9HA92 442 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 KCNMB3Q9NPA1 279 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 KANSL3Q9P2N6 904 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 VAV3Q9UKW4 847 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 CYP46A1Q9Y6A2 500 aa15.54■□□□□ 0.08
CCDC84-208ENST00000534656 EPB41L2O43491 1005 aaKnown RBP15.53■□□□□ 0.08
CCDC84-208ENST00000534656 LILRB3O75022 631 aa15.53■□□□□ 0.08
CCDC84-208ENST00000534656 CNPP09543 421 aaKnown RBP15.53■□□□□ 0.08
CCDC84-208ENST00000534656 SRGAP2CP0DJJ0 459 aa15.53■□□□□ 0.08
CCDC84-208ENST00000534656 HOXA11P31270 313 aaPredicted RBP15.53■□□□□ 0.08
CCDC84-208ENST00000534656 RFC5P40937 340 aa15.53■□□□□ 0.08
CCDC84-208ENST00000534656 AFF1P51825 1210 aaKnown RBP15.53■□□□□ 0.08
CCDC84-208ENST00000534656 UBXN11Q5T124 520 aa15.53■□□□□ 0.08
CCDC84-208ENST00000534656 PPP4R3AQ6IN85 833 aa15.53■□□□□ 0.08
CCDC84-208ENST00000534656 PSPC1Q8WXF1 523 aaKnown RBP15.53■□□□□ 0.08
CCDC84-208ENST00000534656 TMEM143Q96AN5 459 aa15.53■□□□□ 0.08
CCDC84-208ENST00000534656 FAM193BQ96PV7 902 aaPredicted RBP15.53■□□□□ 0.08
CCDC84-208ENST00000534656 LARP6Q9BRS8 491 aaKnown RBP15.53■□□□□ 0.08
CCDC84-208ENST00000534656 TMEM175Q9BSA9 504 aa15.53■□□□□ 0.08
CCDC84-208ENST00000534656 SLKQ9H2G2 1235 aaPredicted RBP15.53■□□□□ 0.08
CCDC84-208ENST00000534656 WRAP73Q9P2S5 460 aaPredicted RBP15.53■□□□□ 0.08
CCDC84-208ENST00000534656 KCNJ14Q9UNX9 436 aa15.53■□□□□ 0.08
CCDC84-208ENST00000534656 FAN1Q9Y2M0 1017 aa15.53■□□□□ 0.08
CCDC84-208ENST00000534656 ZDBF2Q9HCK1 2354 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 CCDC194A0A1B0GVG4 234 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 SPDYE4A6NLX3 237 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 NRP1O14786 923 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 ASAP2O43150 1006 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 SSBP05455 408 aaKnown RBP eCLIP15.52■□□□□ 0.08
CCDC84-208ENST00000534656 GCFC2P16383 781 aaKnown RBP15.52■□□□□ 0.08
CCDC84-208ENST00000534656 NCLP19338 710 aaKnown RBP15.52■□□□□ 0.08
CCDC84-208ENST00000534656 CLCN5P51795 746 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 LAMTOR4Q0VGL1 99 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 STK3Q13188 491 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 CCDC149Q6ZUS6 474 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 OTOP3Q7RTS5 596 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 NEK8Q86SG6 692 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 C4orf19Q8IY42 314 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 PHF20Q9BVI0 1012 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 TM6SF1Q9BZW5 370 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 MFSD1Q9H3U5 465 aa15.52■□□□□ 0.08
CCDC84-208ENST00000534656 MRPL17Q9NRX2 175 aaKnown RBP15.52■□□□□ 0.08
CCDC84-208ENST00000534656 TBX3O15119 743 aa15.51■□□□□ 0.07
CCDC84-208ENST00000534656 GAS2O43903 313 aaKnown RBP15.51■□□□□ 0.07
CCDC84-208ENST00000534656 POMCP01189 267 aa15.51■□□□□ 0.07
CCDC84-208ENST00000534656 SOD2P04179 222 aa15.51■□□□□ 0.07
CCDC84-208ENST00000534656 EPHA7Q15375 998 aa15.51■□□□□ 0.07
CCDC84-208ENST00000534656 C15orf39Q6ZRI6 1047 aa15.51■□□□□ 0.07
CCDC84-208ENST00000534656 OTUD6AQ7L8S5 288 aa15.51■□□□□ 0.07
CCDC84-208ENST00000534656 SMG8Q8ND04 991 aaKnown RBP15.51■□□□□ 0.07
CCDC84-208ENST00000534656 CNNM3Q8NE01 707 aa15.51■□□□□ 0.07
CCDC84-208ENST00000534656 TCP11Q8WWU5 503 aa15.51■□□□□ 0.07
CCDC84-208ENST00000534656 HAS1Q92839 578 aa15.51■□□□□ 0.07
CCDC84-208ENST00000534656 UBN1Q9NPG3 1134 aa15.51■□□□□ 0.07
CCDC84-208ENST00000534656 DENND4AQ7Z401 1863 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 MYO10Q9HD67 2058 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 CCNT1O60563 726 aaKnown RBP15.5■□□□□ 0.07
CCDC84-208ENST00000534656 ITGA4P13612 1032 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 YWHABP31946 246 aaKnown RBP15.5■□□□□ 0.07
CCDC84-208ENST00000534656 NBL1P41271 181 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 TDGQ13569 410 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 EMC2Q15006 297 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 ASCL5Q7RTU5 278 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 FERMT3Q86UX7 667 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 RNF149Q8NC42 400 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 SNX27Q96L92 541 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 LXNQ9BS40 222 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 HERC2P3Q9BVR0 1158 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 BMP2KQ9NSY1 1161 aaPredicted RBP15.5■□□□□ 0.07
CCDC84-208ENST00000534656 RGL1Q9NZL6 768 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 SSX2IPQ9Y2D8 614 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 PLXNA3P51805 1871 aa15.5■□□□□ 0.07
CCDC84-208ENST00000534656 C2CD2LO14523 706 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 ZBTB39O15060 712 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 INPPL1O15357 1258 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 MARCH6O60337 910 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 ERLIN2O94905 339 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 URODP06132 367 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 AXLP30530 894 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 PCBP1Q15365 356 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCDC84-208ENST00000534656 XKR9Q5GH70 373 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 CWF19L1Q69YN2 538 aaKnown RBP15.49■□□□□ 0.07
CCDC84-208ENST00000534656 TAS1R1Q7RTX1 841 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 COLGALT2Q8IYK4 626 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 FLCNQ8NFG4 579 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 CMASQ8NFW8 434 aaPredicted RBP15.49■□□□□ 0.07
CCDC84-208ENST00000534656 DYDC2Q96IM9 177 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 RPS6KC1Q96S38 1066 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 NAP1L4Q99733 375 aaKnown RBP15.49■□□□□ 0.07
CCDC84-208ENST00000534656 ZSWIM4Q9H7M6 989 aa15.49■□□□□ 0.07
CCDC84-208ENST00000534656 KCNK12Q9HB15 430 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms