RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 PPP4R3AQ6IN85 833 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 KIAA1841Q6NSI8 718 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 SRGAP1Q7Z6B7 1085 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 KREMEN2Q8NCW0 462 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 URGCPQ8TCY9 931 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 AUTS2Q8WXX7 1259 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 DHX33Q9H6R0 707 aaKnown RBP14.02□□□□□ -0.17
USF1-211ENST00000534633 STK39Q9UEW8 545 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 INPP5FQ9Y2H2 1132 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 MTCL1Q9Y4B5 1905 aaKnown RBP14.02□□□□□ -0.17
USF1-211ENST00000534633 USP34Q70CQ2 3546 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 CACNA1HO95180 2353 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 CNTNAP2Q9UHC6 1331 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 TBX3O15119 743 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 GAS2O43903 313 aaKnown RBP14.01□□□□□ -0.17
USF1-211ENST00000534633 EPCAMP16422 314 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 XBP1P17861 261 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 AVPR2P30518 371 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 RFC5P40937 340 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 MCM2P49736 904 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 NUBP1P53384 320 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 VCPP55072 806 aaKnown RBP14.01□□□□□ -0.17
USF1-211ENST00000534633 NPEPPSP55786 919 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 MTMR3Q13615 1198 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 ATAT1Q5SQI0 421 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 RARS2Q5T160 578 aaKnown RBP14.01□□□□□ -0.17
USF1-211ENST00000534633 MRPL10Q7Z7H8 261 aaKnown RBP14.01□□□□□ -0.17
USF1-211ENST00000534633 NEK8Q86SG6 692 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 PPFIBP1Q86W92 1011 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 OXER1Q8TDS5 423 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 SLC22A17Q8WUG5 538 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 BCL7CQ8WUZ0 217 aaPredicted RBP14.01□□□□□ -0.17
USF1-211ENST00000534633 PSPC1Q8WXF1 523 aaKnown RBP14.01□□□□□ -0.17
USF1-211ENST00000534633 CEP170P1Q96L14 293 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 PHOX2BQ99453 314 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 NAP1L4Q99733 375 aaKnown RBP14.01□□□□□ -0.17
USF1-211ENST00000534633 GBP3Q9H0R5 595 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 IRF2BPLQ9H1B7 796 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 DNAJB4Q9UDY4 337 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 PCDHB2Q9Y5E7 798 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 PLXNA3P51805 1871 aa14.01□□□□□ -0.17
USF1-211ENST00000534633 SLC11A1P49279 550 aa14□□□□□ -0.17
USF1-211ENST00000534633 CUL4AQ13619 759 aa14□□□□□ -0.17
USF1-211ENST00000534633 EPHA7Q15375 998 aa14□□□□□ -0.17
USF1-211ENST00000534633 PTPN14Q15678 1187 aa14□□□□□ -0.17
USF1-211ENST00000534633 EARS2Q5JPH6 523 aaKnown RBP14□□□□□ -0.17
USF1-211ENST00000534633 AGMOQ6ZNB7 445 aa14□□□□□ -0.17
USF1-211ENST00000534633 C4orf19Q8IY42 314 aa14□□□□□ -0.17
USF1-211ENST00000534633 ZDHHC14Q8IZN3 488 aa14□□□□□ -0.17
USF1-211ENST00000534633 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
USF1-211ENST00000534633 C12orf76Q8N812 135 aaPredicted RBP14□□□□□ -0.17
USF1-211ENST00000534633 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
USF1-211ENST00000534633 TDRD5Q8NAT2 981 aaKnown RBP14□□□□□ -0.17
USF1-211ENST00000534633 TCP11Q8WWU5 503 aa14□□□□□ -0.17
USF1-211ENST00000534633 PRPF31Q8WWY3 499 aaKnown RBP14□□□□□ -0.17
USF1-211ENST00000534633 TMEM175Q9BSA9 504 aa14□□□□□ -0.17
USF1-211ENST00000534633 RSAD1Q9HA92 442 aa14□□□□□ -0.17
USF1-211ENST00000534633 KANSL3Q9P2N6 904 aa14□□□□□ -0.17
USF1-211ENST00000534633 WRAP73Q9P2S5 460 aaPredicted RBP14□□□□□ -0.17
USF1-211ENST00000534633 USTQ9Y2C2 406 aa14□□□□□ -0.17
USF1-211ENST00000534633 ASAP2O43150 1006 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 CCNT1O60563 726 aaKnown RBP13.99□□□□□ -0.17
USF1-211ENST00000534633 BRD1O95696 1058 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 WEE2P0C1S8 567 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 SRGAP2CP0DJJ0 459 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 HOXA11P31270 313 aaPredicted RBP13.99□□□□□ -0.17
USF1-211ENST00000534633 YWHABP31946 246 aaKnown RBP13.99□□□□□ -0.17
USF1-211ENST00000534633 LAMTOR4Q0VGL1 99 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 OTUD6AQ7L8S5 288 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 CABP7Q86V35 215 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 ZNF280BQ86YH2 543 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 HAS1Q92839 578 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 TNFRSF25Q93038 417 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 TMEM143Q96AN5 459 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 FAM193BQ96PV7 902 aaPredicted RBP13.99□□□□□ -0.17
USF1-211ENST00000534633 LXNQ9BS40 222 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 VN1R3Q9BXE9 311 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 MINDY3Q9H8M7 445 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 SFXN1Q9H9B4 322 aa13.99□□□□□ -0.17
USF1-211ENST00000534633 DBR1Q9UK59 544 aaKnown RBP13.99□□□□□ -0.17
USF1-211ENST00000534633 MARCH6O60337 910 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 B4GALT3O60512 393 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 DDHD2O94830 711 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 PDGFBP01127 241 aaPredicted RBP13.98□□□□□ -0.17
USF1-211ENST00000534633 ALDH2P05091 517 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 NCLP19338 710 aaKnown RBP13.98□□□□□ -0.17
USF1-211ENST00000534633 FOSBP53539 338 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 NR5A1Q13285 461 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 EMC2Q15006 297 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 PCBP1Q15365 356 aaKnown RBP eCLIP13.98□□□□□ -0.17
USF1-211ENST00000534633 UBXN11Q5T124 520 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 PIK3AP1Q6ZUJ8 805 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 FERMT3Q86UX7 667 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 SLFN12Q8IYM2 578 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 CNNM3Q8NE01 707 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 WASF1Q92558 559 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 SNX21Q969T3 373 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 EMILIN2Q9BXX0 1053 aa13.98□□□□□ -0.17
USF1-211ENST00000534633 ZSWIM4Q9H7M6 989 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms