RNA–Protein interactions for RNA: ENST00000534219.5

PTPRJ-206, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 3

Gene PTPRJ, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-206ENST00000534219 EYA4O95677 639 aa27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 SRGAP2BP0DMP2 458 aa27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 COASYQ13057 564 aa27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 PCBP1Q15365 356 aaKnown RBP eCLIP27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 UBXN11Q5T124 520 aa27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 AGMOQ6ZNB7 445 aa27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 MRPL10Q7Z7H8 261 aaKnown RBP27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 NACC1Q96RE7 527 aa27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 POP1Q99575 1024 aaKnown RBP27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 POLR3CQ9BUI4 534 aaPredicted RBP27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 POLR3FQ9H1D9 316 aaPredicted RBP27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 NRDE2Q9H7Z3 1164 aa27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 RSAD1Q9HA92 442 aa27.72■■■□□ 2.03
PTPRJ-206ENST00000534219 TSPAN1O60635 241 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 GLRA2P23416 452 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 AXLP30530 894 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 TRAPPC10P48553 1259 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 POU5F1BQ06416 359 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 NBR1Q14596 966 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 SMC1AQ14683 1233 aaKnown RBP27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 BMS1Q14692 1282 aaKnown RBP27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 TMEM31Q5JXX7 168 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 LLGL2Q6P1M3 1020 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 SMRP1Q8NCR6 262 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 VN1R2Q8NFZ6 395 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 CPB2Q96IY4 423 aa27.71■■■□□ 2.03
PTPRJ-206ENST00000534219 CARNS1A5YM72 827 aa27.7■■■□□ 2.02
PTPRJ-206ENST00000534219 MBTD1Q05BQ5 628 aa27.7■■■□□ 2.02
PTPRJ-206ENST00000534219 NOTUMQ6P988 496 aa27.7■■■□□ 2.02
PTPRJ-206ENST00000534219 POTEGQ6S5H5 508 aa27.7■■■□□ 2.02
PTPRJ-206ENST00000534219 CNNM3Q8NE01 707 aa27.7■■■□□ 2.02
PTPRJ-206ENST00000534219 FAM193BQ96PV7 902 aaPredicted RBP27.7■■■□□ 2.02
PTPRJ-206ENST00000534219 DBR1Q9UK59 544 aaKnown RBP27.7■■■□□ 2.02
PTPRJ-206ENST00000534219 CNTNAP2Q9UHC6 1331 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 C19orf67A6NJJ6 358 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 GALTP07902 379 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 ITGA4P13612 1032 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 ALADP13716 330 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 NCLP19338 710 aaKnown RBP27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 RPA1P27694 616 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 IFNLR1Q8IU57 520 aaPredicted RBP27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 VPS52Q8N1B4 723 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 MRPL43Q8N983 215 aaKnown RBP27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 EIF2AQ9BY44 585 aaKnown RBP27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 UBN1Q9NPG3 1134 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 GPRC5CQ9NQ84 441 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 KANSL3Q9P2N6 904 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 DNAJB4Q9UDY4 337 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 KIF3AQ9Y496 699 aa27.69■■■□□ 2.02
PTPRJ-206ENST00000534219 FAM86C2PA6NEL3 165 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 LRRIQ4A6NIV6 560 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 CXCL14O95715 111 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 POMCP01189 267 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 U2AF2P26368 475 aaKnown RBP eCLIP27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 AFF1P51825 1210 aaKnown RBP27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 TMEM173Q86WV6 379 aaPredicted RBP27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 ZNF280BQ86YH2 543 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 TMEM87AQ8NBN3 555 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 MCPH1Q8NEM0 835 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 CCDC51Q96ER9 411 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 IGSF21Q96ID5 467 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 LRFN3Q9BTN0 628 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 TRIM6Q9C030 488 aaPredicted RBP27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 USP15Q9Y4E8 981 aaPredicted RBP27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 IPPQ9Y573 584 aa27.68■■■□□ 2.02
PTPRJ-206ENST00000534219 ARHGEF35A5YM69 484 aa27.67■■■□□ 2.02
PTPRJ-206ENST00000534219 SLC11A1P49279 550 aa27.67■■■□□ 2.02
PTPRJ-206ENST00000534219 HAUS3Q68CZ6 603 aa27.67■■■□□ 2.02
PTPRJ-206ENST00000534219 SMG8Q8ND04 991 aaKnown RBP27.67■■■□□ 2.02
PTPRJ-206ENST00000534219 NFKBIZQ9BYH8 718 aa27.67■■■□□ 2.02
PTPRJ-206ENST00000534219 CSRNP2Q9H175 543 aa27.67■■■□□ 2.02
PTPRJ-206ENST00000534219 LRWD1Q9UFC0 647 aa27.67■■■□□ 2.02
PTPRJ-206ENST00000534219 C2orf71A6NGG8 1288 aa27.66■■■□□ 2.02
PTPRJ-206ENST00000534219 CCT6AP40227 531 aaKnown RBP27.66■■■□□ 2.02
PTPRJ-206ENST00000534219 AMHR2Q16671 573 aa27.66■■■□□ 2.02
PTPRJ-206ENST00000534219 MCTP1Q6DN14 999 aa27.66■■■□□ 2.02
PTPRJ-206ENST00000534219 TMEM184AQ6ZMB5 413 aa27.66■■■□□ 2.02
PTPRJ-206ENST00000534219 DDX53Q86TM3 631 aaKnown RBP27.66■■■□□ 2.02
PTPRJ-206ENST00000534219 C4orf32Q8N8J7 132 aa27.66■■■□□ 2.02
PTPRJ-206ENST00000534219 APOL6Q9BWW8 343 aa27.66■■■□□ 2.02
PTPRJ-206ENST00000534219 APOL5Q9BWW9 433 aa27.66■■■□□ 2.02
PTPRJ-206ENST00000534219 HES2Q9Y543 173 aa27.66■■■□□ 2.02
PTPRJ-206ENST00000534219 C5orf42Q9H799 3197 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 B4GALT5O43286 388 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 DCXO43602 365 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 GPR37L1O60883 481 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 DDHD2O94830 711 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 ALDH2P05091 517 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 ARF4P18085 180 aaPredicted RBP27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 FXR2P51116 673 aaKnown RBP eCLIP27.65■■■□□ 2.022e-6■■□□□ 12.1
PTPRJ-206ENST00000534219 PTGDRQ13258 359 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 KCNC3Q14003 757 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 ANKRD54Q6NXT1 300 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 PADI6Q6TGC4 694 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 BCL7CQ8WUZ0 217 aaPredicted RBP27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 TMX3Q96JJ7 454 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 RNF39Q9H2S5 420 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 PCDHB6Q9Y5E3 794 aa27.65■■■□□ 2.02
PTPRJ-206ENST00000534219 B4GALT3O60512 393 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms