RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 MRPL10Q7Z7H8 261 aaKnown RBP18.85■□□□□ 0.61
CAPRIN1-216ENST00000534042 ZNF280BQ86YH2 543 aa18.85■□□□□ 0.61
CAPRIN1-216ENST00000534042 C4orf19Q8IY42 314 aa18.85■□□□□ 0.61
CAPRIN1-216ENST00000534042 TCP11Q8WWU5 503 aa18.85■□□□□ 0.61
CAPRIN1-216ENST00000534042 HAS1Q92839 578 aa18.85■□□□□ 0.61
CAPRIN1-216ENST00000534042 RSAD1Q9HA92 442 aa18.85■□□□□ 0.61
CAPRIN1-216ENST00000534042 KANSL3Q9P2N6 904 aa18.85■□□□□ 0.61
CAPRIN1-216ENST00000534042 WRAP73Q9P2S5 460 aaPredicted RBP18.85■□□□□ 0.61
CAPRIN1-216ENST00000534042 DBR1Q9UK59 544 aaKnown RBP18.85■□□□□ 0.61
CAPRIN1-216ENST00000534042 STK36Q9NRP7 1315 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 CNTNAP2Q9UHC6 1331 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 ASAP2O43150 1006 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 GAS2O43903 313 aaKnown RBP18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 PDGFBP01127 241 aaPredicted RBP18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 ALDH2P05091 517 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 YWHABP31946 246 aaKnown RBP18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 PTPN14Q15678 1187 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 XKR9Q5GH70 373 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 KANK3Q6NY19 840 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 CABP7Q86V35 215 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 TDRD5Q8NAT2 981 aaKnown RBP18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 LXNQ9BS40 222 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 VN1R3Q9BXE9 311 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 MINDY3Q9H8M7 445 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 BMP2KQ9NSY1 1161 aaPredicted RBP18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 STK39Q9UEW8 545 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 FAN1Q9Y2M0 1017 aa18.84■□□□□ 0.61
CAPRIN1-216ENST00000534042 SPDYE4A6NLX3 237 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 B4GALT3O60512 393 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 DDHD2O94830 711 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 BAG4O95429 457 aaKnown RBP18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 BRD1O95696 1058 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 HOXA11P31270 313 aaPredicted RBP18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 EMC2Q15006 297 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 NCAPH2Q6IBW4 605 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 TMC5Q6UXY8 1006 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 ZDHHC14Q8IZN3 488 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 PLCD3Q8N3E9 789 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 RNF149Q8NC42 400 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 OXER1Q8TDS5 423 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 TMEM175Q9BSA9 504 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 EMILIN2Q9BXX0 1053 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 IRF2BPLQ9H1B7 796 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 ZSWIM4Q9H7M6 989 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 GJB4Q9NTQ9 266 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 RGL1Q9NZL6 768 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 LIMD1Q9UGP4 676 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 USTQ9Y2C2 406 aa18.83■□□□□ 0.6
CAPRIN1-216ENST00000534042 PTPRZ1P23471 2315 aaPredicted RBP18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 PFKFB2O60825 505 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 ERLIN2O94905 339 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 POMCP01189 267 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 SSBP05455 408 aaKnown RBP eCLIP18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 ASGR2P07307 311 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 KLRC2P26717 231 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 CTTNQ14247 550 aaKnown RBP18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 UBXN11Q5T124 520 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 FERMT3Q86UX7 667 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 POTEDQ86YR6 584 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 SLFN12Q8IYM2 578 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 CNNM3Q8NE01 707 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 DYDC2Q96IM9 177 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 KLHL5Q96PQ7 755 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 SFXN1Q9H9B4 322 aa18.82■□□□□ 0.6
CAPRIN1-216ENST00000534042 CNPP09543 421 aaKnown RBP18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 ITGA4P13612 1032 aa18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 NCLP19338 710 aaKnown RBP18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 AFF1P51825 1210 aaKnown RBP18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 NUBP1P53384 320 aa18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 CYP4A11Q02928 519 aa18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 TPH2Q8IWU9 490 aa18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 WASF1Q92558 559 aa18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 MTRQ99707 1265 aa18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 UBN1Q9NPG3 1134 aa18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 MRPL17Q9NRX2 175 aaKnown RBP18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 FAM86C1Q9NVL1 165 aa18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 ORC3Q9UBD5 711 aaPredicted RBP18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 TPCN1Q9ULQ1 816 aa18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 ARID2Q68CP9 1835 aa18.81■□□□□ 0.6
CAPRIN1-216ENST00000534042 NRP1O14786 923 aa18.8■□□□□ 0.6
CAPRIN1-216ENST00000534042 ZBTB39O15060 712 aa18.8■□□□□ 0.6
CAPRIN1-216ENST00000534042 DTNBO60941 627 aa18.8■□□□□ 0.6
CAPRIN1-216ENST00000534042 SPIRE1Q08AE8 756 aa18.8■□□□□ 0.6
CAPRIN1-216ENST00000534042 MXD4Q14582 209 aaPredicted RBP18.8■□□□□ 0.6
CAPRIN1-216ENST00000534042 PCBP1Q15365 356 aaKnown RBP eCLIP18.8■□□□□ 0.6
CAPRIN1-216ENST00000534042 GPR149Q86SP6 731 aa18.8■□□□□ 0.6
CAPRIN1-216ENST00000534042 ATOH1Q92858 354 aaPredicted RBP18.8■□□□□ 0.6
CAPRIN1-216ENST00000534042 SMOC2Q9H3U7 446 aa18.8■□□□□ 0.6
CAPRIN1-216ENST00000534042 TDRD15B5MCY1 1934 aaKnown RBP18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 LILRB3O75022 631 aa18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 URODP06132 367 aa18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 AXLP30530 894 aa18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 CLCN4P51793 760 aa18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 PTENP60484 403 aa18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 NCBP1Q09161 790 aaKnown RBP18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 TFDP1Q14186 410 aa18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 EARS2Q5JPH6 523 aaKnown RBP18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 CCDC149Q6ZUS6 474 aa18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 SMG8Q8ND04 991 aaKnown RBP18.79■□□□□ 0.6
CAPRIN1-216ENST00000534042 ACSF2Q96CM8 615 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms