RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 H0Y858 1186 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 EPB41L2O43491 1005 aaKnown RBP20.18■□□□□ 0.82
UBXN1-216ENST00000533908 SSBP05455 408 aaKnown RBP eCLIP20.18■□□□□ 0.82
UBXN1-216ENST00000533908 CNPP09543 421 aaKnown RBP20.18■□□□□ 0.82
UBXN1-216ENST00000533908 GIT2Q14161 759 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 EPHA7Q15375 998 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 SRGAP1Q7Z6B7 1085 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 NEK8Q86SG6 692 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 C4orf19Q8IY42 314 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 UBALD2Q8IYN6 164 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 TMEM105Q8N8V8 129 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 SLC7A3Q8WY07 619 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 JPH2Q9BR39 696 aaPredicted RBP20.18■□□□□ 0.82
UBXN1-216ENST00000533908 RNF39Q9H2S5 420 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 PDRG1Q9NUG6 133 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 DZANK1Q9NVP4 752 aa20.18■□□□□ 0.82
UBXN1-216ENST00000533908 CCDC194A0A1B0GVG4 234 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 FAM205CA6NFA0 338 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 NRP1O14786 923 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 POMCP01189 267 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 ALDH2P05091 517 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 SPIRE1Q08AE8 756 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 CPLX2Q6PUV4 134 aaKnown RBP20.17■□□□□ 0.82
UBXN1-216ENST00000533908 PIK3AP1Q6ZUJ8 805 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 TAS1R1Q7RTX1 841 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 GPR149Q86SP6 731 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 TMEM87AQ8NBN3 555 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 SMG8Q8ND04 991 aaKnown RBP20.17■□□□□ 0.82
UBXN1-216ENST00000533908 PSPC1Q8WXF1 523 aaKnown RBP20.17■□□□□ 0.82
UBXN1-216ENST00000533908 DYDC2Q96IM9 177 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 LXNQ9BS40 222 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 RSAD1Q9HA92 442 aa20.17■□□□□ 0.82
UBXN1-216ENST00000533908 DBR1Q9UK59 544 aaKnown RBP20.17■□□□□ 0.82
UBXN1-216ENST00000533908 ZFHX2Q9C0A1 2572 aaPredicted RBP20.17■□□□□ 0.82
UBXN1-216ENST00000533908 CCNT1O60563 726 aaKnown RBP20.16■□□□□ 0.82
UBXN1-216ENST00000533908 CTDNEP1O95476 244 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 YWHABP31946 246 aaKnown RBP20.16■□□□□ 0.82
UBXN1-216ENST00000533908 RFC5P40937 340 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 CLCN4P51793 760 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 CTTNQ14247 550 aaKnown RBP20.16■□□□□ 0.82
UBXN1-216ENST00000533908 FERMT3Q86UX7 667 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 CABP7Q86V35 215 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 POTEDQ86YR6 584 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 TDRD5Q8NAT2 981 aaKnown RBP20.16■□□□□ 0.82
UBXN1-216ENST00000533908 RNF149Q8NC42 400 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 ATOH1Q92858 354 aaPredicted RBP20.16■□□□□ 0.82
UBXN1-216ENST00000533908 XPNPEP1Q9NQW7 623 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 MARCH5Q9NX47 278 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 MIOSQ9NXC5 875 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 TPCN1Q9ULQ1 816 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 USTQ9Y2C2 406 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 FAN1Q9Y2M0 1017 aa20.16■□□□□ 0.82
UBXN1-216ENST00000533908 USP34Q70CQ2 3546 aa20.15■□□□□ 0.82
UBXN1-216ENST00000533908 TBX3O15119 743 aa20.15■□□□□ 0.82
UBXN1-216ENST00000533908 DKC1O60832 514 aaKnown RBP eCLIP20.15■□□□□ 0.82
UBXN1-216ENST00000533908 EFEMP2O95967 443 aa20.15■□□□□ 0.82
UBXN1-216ENST00000533908 GCFC2P16383 781 aaKnown RBP20.15■□□□□ 0.82
UBXN1-216ENST00000533908 NCLP19338 710 aaKnown RBP20.15■□□□□ 0.82
UBXN1-216ENST00000533908 KLRC2P26717 231 aa20.15■□□□□ 0.82
UBXN1-216ENST00000533908 CYP4A11Q02928 519 aa20.15■□□□□ 0.82
UBXN1-216ENST00000533908 EMC2Q15006 297 aa20.15■□□□□ 0.82
UBXN1-216ENST00000533908 XKR9Q5GH70 373 aa20.15■□□□□ 0.82
UBXN1-216ENST00000533908 URGCPQ8TCY9 931 aa20.15■□□□□ 0.82
UBXN1-216ENST00000533908 TMEM175Q9BSA9 504 aa20.15■□□□□ 0.82
UBXN1-216ENST00000533908 EIF2AQ9BY44 585 aaKnown RBP20.15■□□□□ 0.82
UBXN1-216ENST00000533908 CARNS1A5YM72 827 aa20.14■□□□□ 0.81
UBXN1-216ENST00000533908 F8W810 466 aa20.14■□□□□ 0.81
UBXN1-216ENST00000533908 GALR2O43603 387 aaPredicted RBP20.14■□□□□ 0.81
UBXN1-216ENST00000533908 SLITRK3O94933 977 aa20.14■□□□□ 0.81
UBXN1-216ENST00000533908 NCAPH2Q6IBW4 605 aa20.14■□□□□ 0.81
UBXN1-216ENST00000533908 PPFIBP1Q86W92 1011 aa20.14■□□□□ 0.81
UBXN1-216ENST00000533908 PLCD3Q8N3E9 789 aa20.14■□□□□ 0.81
UBXN1-216ENST00000533908 KANSL3Q9P2N6 904 aa20.14■□□□□ 0.81
UBXN1-216ENST00000533908 HES2Q9Y543 173 aa20.14■□□□□ 0.81
UBXN1-216ENST00000533908 PPME1Q9Y570 386 aa20.14■□□□□ 0.81
UBXN1-216ENST00000533908 DENND4AQ7Z401 1863 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 STK36Q9NRP7 1315 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 CNTNAP2Q9UHC6 1331 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 ASAP2O43150 1006 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 TSPAN1O60635 241 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 PFKFB2O60825 505 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 FDPSP14324 419 aaKnown RBP20.13■□□□□ 0.81
UBXN1-216ENST00000533908 PTENP60484 403 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 NR5A1Q13285 461 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 TPH2Q8IWU9 490 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 EXOC8Q8IYI6 725 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 COLGALT2Q8IYK4 626 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 TNFRSF25Q93038 417 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 CPB2Q96IY4 423 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 FAM193BQ96PV7 902 aaPredicted RBP20.13■□□□□ 0.81
UBXN1-216ENST00000533908 GAD1Q99259 594 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 EMILIN2Q9BXX0 1053 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 ZSWIM4Q9H7M6 989 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 SFXN1Q9H9B4 322 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 PRG3Q9Y2Y8 225 aaPredicted RBP20.13■□□□□ 0.81
UBXN1-216ENST00000533908 IPPQ9Y573 584 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 PLXNA3P51805 1871 aa20.13■□□□□ 0.81
UBXN1-216ENST00000533908 A0A087WWV3 80 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 C2CD2LO14523 706 aa20.12■□□□□ 0.81
UBXN1-216ENST00000533908 INPPL1O15357 1258 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms