RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CASRP41180 1078 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 CD69Q07108 199 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 PTPAQ15257 358 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 C21orf62-AS1Q17RA5 79 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 NAIF1Q69YI7 327 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-205ENST00000533776 DPY19L2P1Q6NXN4 242 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 LRRC55Q6ZSA7 311 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 UNC5BQ8IZJ1 945 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 OR5M3Q8NGP4 307 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 GPR150Q8NGU9 434 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 CHTF18Q8WVB6 975 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 FERMT2Q96AC1 680 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 ZNF768Q9H5H4 540 aaKnown RBP4.41□□□□□ -1.7
BRCA2-205ENST00000533776 IFT57Q9NWB7 429 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.41□□□□□ -1.7
BRCA2-205ENST00000533776 THG1LQ9NWX6 298 aaKnown RBP4.41□□□□□ -1.7
BRCA2-205ENST00000533776 MAGEC2Q9UBF1 373 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-205ENST00000533776 EIF2B4Q9UI10 523 aaKnown RBP4.41□□□□□ -1.7
BRCA2-205ENST00000533776 USP18Q9UMW8 372 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 FZD1Q9UP38 647 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 PCDHB6Q9Y5E3 794 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 MYPNQ86TC9 1320 aa4.41□□□□□ -1.7
BRCA2-205ENST00000533776 HOXA3O43365 443 aaPredicted RBP4.4□□□□□ -1.71
BRCA2-205ENST00000533776 RFPL3O75679 317 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 RECQL4O94761 1208 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 GYPEP15421 78 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 PROZP22891 400 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 NEK4P51957 841 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 PTTG1IPP53801 180 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 CSRP2Q16527 193 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 ZBTB41Q5SVQ8 909 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 PASD1Q8IV76 773 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 EFHBQ8N7U6 833 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 CDYL2Q8N8U2 506 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 ENKD1Q9H0I2 346 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 ZSWIM4Q9H7M6 989 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 TMEM260Q9NX78 707 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 MSRAQ9UJ68 235 aa4.4□□□□□ -1.71
BRCA2-205ENST00000533776 LCHNA4D1U4 455 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 TRIM24O15164 1050 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 LY86O95711 162 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 NUDT3O95989 172 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 F2P00734 622 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 ZFP36P26651 326 aaKnown RBP4.39□□□□□ -1.71
BRCA2-205ENST00000533776 DSG1Q02413 1049 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 TIGD2Q4W5G0 525 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 PLEKHG4Q58EX7 1191 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 ESPNLQ6ZVH7 1005 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 PPP1R14CQ8TAE6 165 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 SREK1Q8WXA9 508 aaKnown RBP4.39□□□□□ -1.71
BRCA2-205ENST00000533776 IL17RAQ96F46 866 aa4.39□□□□□ -1.71
BRCA2-205ENST00000533776 CPEB1Q9BZB8 566 aaKnown RBP4.39□□□□□ -1.71
BRCA2-205ENST00000533776 INTS7Q9NVH2 962 aaKnown RBP4.39□□□□□ -1.71
BRCA2-205ENST00000533776 GRID2IPA4D2P6 1211 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 TGM5O43548 720 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 DNAJC6O75061 913 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 PPFIA4O75335 1185 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 PFKMP08237 780 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 XPAP23025 273 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-205ENST00000533776 APOBEC3AP31941 199 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-205ENST00000533776 DUSP2Q05923 314 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 MGAT5Q09328 741 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 MRPL49Q13405 166 aaKnown RBP4.38□□□□□ -1.71
BRCA2-205ENST00000533776 LRRC32Q14392 662 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 VPS72Q15906 364 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 CNNM4Q6P4Q7 775 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 FAM83AQ86UY5 434 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 XYLT1Q86Y38 959 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 MSL3Q8N5Y2 521 aaKnown RBP4.38□□□□□ -1.71
BRCA2-205ENST00000533776 GLB1L3Q8NCI6 653 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-205ENST00000533776 OR52N2Q8NGI0 321 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 VOPP1Q96AW1 172 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 ZNF496Q96IT1 587 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-205ENST00000533776 GPR101Q96P66 508 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-205ENST00000533776 FDXACB1Q9BRP7 624 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-205ENST00000533776 ORAI3Q9BRQ5 295 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 NDC1Q9BTX1 674 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 LSM14BQ9BX40 385 aaKnown RBP4.38□□□□□ -1.71
BRCA2-205ENST00000533776 KCNH6Q9H252 994 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 MS4A5Q9H3V2 200 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 TRPM5Q9NZQ8 1165 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.38□□□□□ -1.71
BRCA2-205ENST00000533776 HDAC5Q9UQL6 1122 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 CD2APQ9Y5K6 639 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 HS3ST4Q9Y661 456 aa4.38□□□□□ -1.71
BRCA2-205ENST00000533776 AHRRA9YTQ3 701 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 LPXNO60711 386 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 SEC24DO94855 1032 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-205ENST00000533776 RHOBTB3O94955 611 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 LMNAP02545 664 aaKnown RBP4.37□□□□□ -1.71
BRCA2-205ENST00000533776 LAG3P18627 525 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 ADRA1BP35368 520 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 GZMKP49863 264 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 KPNA1P52294 538 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-205ENST00000533776 WNT3AP56704 352 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 FAM189BP81408 668 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 HECTD2Q5U5R9 776 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 LMBR1LQ6UX01 489 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 TAS1R1Q7RTX1 841 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 KIF18BQ86Y91 864 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms