RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 WDR93Q6P2C0 686 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 MYCT1Q8N699 235 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 SMCR8Q8TEV9 937 aaPredicted RBP10.55□□□□□ -0.72
CHKA-207ENST00000533728 SLC35C1Q96A29 364 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 GPRASP2Q96D09 838 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 AGBL1Q96MI9 1066 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 LXNQ9BS40 222 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 PARD6BQ9BYG5 372 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 TMEM206Q9H813 350 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 ELP3Q9H9T3 547 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 ZNF446Q9NWS9 450 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 COL20A1Q9P218 1284 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 LARSQ9P2J5 1176 aaKnown RBP10.55□□□□□ -0.72
CHKA-207ENST00000533728 CPA4Q9UI42 421 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 INTUQ9ULD6 942 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 GABRQQ9UN88 632 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 CTDP1Q9Y5B0 961 aaPredicted RBP10.55□□□□□ -0.72
CHKA-207ENST00000533728 FHOD1Q9Y613 1164 aa10.55□□□□□ -0.72
CHKA-207ENST00000533728 RCCD1A6NED2 376 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 RSPH10B2B2RC85 870 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 CES2O00748 559 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 N4BP1O75113 896 aaKnown RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 FLOT1O75955 427 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 AKAP3O75969 853 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 CCDC172P0C7W6 258 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 RSPH10BP0C881 870 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 PNMA6AP0CW24 399 aaPredicted RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 ZSCAN20P17040 1043 aaPredicted RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 TAL1P17542 331 aaPredicted RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 VCAM1P19320 739 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 SCP2P22307 547 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 DNAJB2P25686 324 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 PON1P27169 355 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 ABCD1P33897 745 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 QARSP47897 775 aaKnown RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 JAM2P57087 298 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 POLR2FP61218 127 aaKnown RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 PPATQ06203 517 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 MAPK7Q13164 816 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 VGLL4Q14135 290 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 PGM5Q15124 567 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 ZYXQ15942 572 aaKnown RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 IFI16Q16666 785 aaKnown RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 LRRC26Q2I0M4 334 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 ZNF746Q6NUN9 644 aaPredicted RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 ERO1BQ86YB8 467 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 ZNF280CQ8ND82 737 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 PXYLP1Q8TE99 480 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 PIGOQ8TEQ8 1089 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 KCNN1Q92952 543 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 NOX5Q96PH1 765 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 ANKZF1Q9H8Y5 726 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 C17orf75Q9HAS0 396 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 ZCCHC17Q9NP64 241 aaKnown RBP10.54□□□□□ -0.72
CHKA-207ENST00000533728 PXMP2Q9NR77 195 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 TRIM10Q9UDY6 481 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 KCNG1Q9UIX4 513 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 SNX12Q9UMY4 172 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 KCNH4Q9UQ05 1017 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 USP20Q9Y2K6 914 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 NFASCO94856 1347 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 MYO15AQ9UKN7 3530 aa10.54□□□□□ -0.72
CHKA-207ENST00000533728 SPTBN2O15020 2390 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 WDR64B1ANS9 1081 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 VWA5AO00534 786 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 NFIBO00712 420 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 ATP1A1P05023 1023 aaKnown RBP10.53□□□□□ -0.72
CHKA-207ENST00000533728 PLEKP08567 350 aaPredicted RBP10.53□□□□□ -0.72
CHKA-207ENST00000533728 ALAS1P13196 640 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 UCHL3P15374 230 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 FERP16591 822 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 CCND2P30279 289 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 FCGRTP55899 365 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 RPS6P62753 249 aaKnown RBP10.53□□□□□ -0.72
CHKA-207ENST00000533728 MRPS9P82933 396 aaKnown RBP10.53□□□□□ -0.72
CHKA-207ENST00000533728 CYP27A1Q02318 531 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 KLHL30Q0D2K2 578 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 PPIL2Q13356 520 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 MTMR1Q13613 665 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 NAB2Q15742 525 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 TDRD12Q587J7 1177 aaKnown RBP10.53□□□□□ -0.72
CHKA-207ENST00000533728 PADI6Q6TGC4 694 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 RNF207Q6ZRF8 634 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 NLRX1Q86UT6 975 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 VPS36Q86VN1 386 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 FAM186BQ8IYM0 893 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 MMGT1Q8N4V1 131 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 REPS2Q8NFH8 660 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 CDHR1Q96JP9 859 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 CALR3Q96L12 384 aaKnown RBP10.53□□□□□ -0.72
CHKA-207ENST00000533728 DRC1Q96MC2 740 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 CNTNAP3BQ96NU0 1288 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 WRNIP1Q96S55 665 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 PDCD2LQ9BRP1 358 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 CNTNAP3Q9BZ76 1288 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 UBXN6Q9BZV1 441 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 PRDM12Q9H4Q4 367 aa10.53□□□□□ -0.72
CHKA-207ENST00000533728 RPAP3Q9H6T3 665 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms