RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 PAGE5Q96GU1 130 aa16.06■□□□□ 0.16
SF3B2-214ENST00000533595 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
SF3B2-214ENST00000533595 TMEM134Q9H6X4 195 aa16.06■□□□□ 0.16
SF3B2-214ENST00000533595 PANK4Q9NVE7 773 aa16.06■□□□□ 0.16
SF3B2-214ENST00000533595 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
SF3B2-214ENST00000533595 SEL1LQ9UBV2 794 aa16.06■□□□□ 0.16
SF3B2-214ENST00000533595 CNTNAP2Q9UHC6 1331 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 FRMD3A2A2Y4 597 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 GRXCR1A8MXD5 290 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 C9IYK1 514 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 ACKR2O00590 384 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 GADD45BO75293 160 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-214ENST00000533595 UPP2O95045 317 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 MAPTP10636 758 aaKnown RBP16.05■□□□□ 0.16
SF3B2-214ENST00000533595 ARF4P18085 180 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-214ENST00000533595 SCP2P22307 547 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 FAM189BP81408 668 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 FAM160A1Q05DH4 1040 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 PRPF4BQ13523 1007 aaKnown RBP16.05■□□□□ 0.16
SF3B2-214ENST00000533595 TMEM132AQ24JP5 1023 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 HERC4Q5GLZ8 1057 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-214ENST00000533595 FAM117BQ6P1L5 589 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 NOTUMQ6P988 496 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 KRBA2Q6ZNG9 492 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 HAUS6Q7Z4H7 955 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 TMCO2Q7Z6W1 182 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-214ENST00000533595 SFR1Q86XK3 245 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 GRAMD1CQ8IYS0 662 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 FMR1NBQ8N0W7 255 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-214ENST00000533595 SLC17A8Q8NDX2 589 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 CNNM3Q8NE01 707 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 ENGASEQ8NFI3 743 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 CCDC51Q96ER9 411 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 CPB2Q96IY4 423 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 GBP4Q96PP9 640 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 TRAIPQ9BWF2 469 aa16.05■□□□□ 0.16
SF3B2-214ENST00000533595 PTPRSQ13332 1948 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 A0A0U1RQF3 1178 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 A0A1B0GUA9 196 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 K7ENM7 598 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 PRPF40AO75400 957 aaKnown RBP16.04■□□□□ 0.16
SF3B2-214ENST00000533595 GJB5O95377 273 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 MYL1P05976 194 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 STAG3L1P0CL83 205 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 IBSPP21815 317 aaPredicted RBP16.04■□□□□ 0.16
SF3B2-214ENST00000533595 RAB27AP51159 221 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 UBE2HP62256 183 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 SMAD3P84022 425 aaKnown RBP16.04■□□□□ 0.16
SF3B2-214ENST00000533595 STRN3Q13033 797 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 SNW1Q13573 536 aaKnown RBP16.04■□□□□ 0.16
SF3B2-214ENST00000533595 CUL4BQ13620 913 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 KANK3Q6NY19 840 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 TAS1R3Q7RTX0 852 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 NPAS4Q8IUM7 802 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 CCDC34Q96HJ3 373 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 FIZ1Q96SL8 496 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 BLZF1Q9H2G9 400 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 LRFN2Q9ULH4 789 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 PCDHB7Q9Y5E2 793 aa16.04■□□□□ 0.16
SF3B2-214ENST00000533595 GTPBP6O43824 516 aaPredicted RBP16.03■□□□□ 0.16
SF3B2-214ENST00000533595 TLL1O43897 1013 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 EDN1P05305 212 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 SKIP12755 728 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 CASP1P29466 404 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 NMT1P30419 496 aaKnown RBP16.03■□□□□ 0.16
SF3B2-214ENST00000533595 ABCD1P33897 745 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 RABGGTBP53611 331 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 COASYQ13057 564 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 RAB30Q15771 203 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 ECHDC2Q86YB7 292 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 CRIPAKQ8N1N5 446 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 KCNN1Q92952 543 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 MRPL4Q9BYD3 311 aaKnown RBP16.03■□□□□ 0.16
SF3B2-214ENST00000533595 ST6GALNAC4Q9H4F1 302 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 ELAC1Q9H777 363 aaKnown RBP16.03■□□□□ 0.16
SF3B2-214ENST00000533595 MRPL44Q9H9J2 332 aaKnown RBP16.03■□□□□ 0.16
SF3B2-214ENST00000533595 OLFML3Q9NRN5 406 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 FAM105AQ9NUU6 356 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 TMEM161AQ9NX61 479 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 PCDHA11Q9Y5I1 949 aa16.03■□□□□ 0.16
SF3B2-214ENST00000533595 PVALEFA0A1B0GWK0 134 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 TTLL13PA6NNM8 815 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 N4BP3O15049 544 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 ZNF623O75123 536 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 NR1I2O75469 434 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 EOMESO95936 686 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 GTF2BQ00403 316 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 UBXN11Q5T124 520 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 NT5DC1Q5TFE4 455 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 ATF7IP2Q5U623 682 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 SLC27A1Q6PCB7 646 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 UNC13DQ70J99 1090 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 ZNF720Q7Z2F6 126 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 CDR2LQ86X02 465 aaPredicted RBP16.02■□□□□ 0.16
SF3B2-214ENST00000533595 RNF169Q8NCN4 708 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 RAD9AQ99638 391 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 PBX4Q9BYU1 374 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 PDZD7Q9H5P4 517 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 TBC1D7Q9P0N9 293 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 MSRAQ9UJ68 235 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms