RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 GPR32O75388 356 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 DEXIO95424 95 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 SMARCA1P28370 1054 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 CLCN4P51793 760 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 STARD6P59095 220 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 GUCY1B3Q02153 619 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 PPM1JQ5JR12 505 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 FAM160B1Q5W0V3 765 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 FEZF2Q8TBJ5 459 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 HELQQ8TDG4 1101 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 PIBF1Q8WXW3 757 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 RRP36Q96EU6 259 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 IGSF21Q96ID5 467 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 PPP1R16BQ96T49 567 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 EPC1Q9H2F5 836 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 PSTPIP2Q9H939 334 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 KCNH7Q9NS40 1196 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 GJB4Q9NTQ9 266 aa12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 SPATA6Q9NWH7 488 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 SEC63Q9UGP8 760 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 SMG5Q9UPR3 1016 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-213ENST00000533149 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 SPDYE3A6NKU9 549 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 TBC1D4O60343 1298 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 ATG7O95352 703 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 GLULP15104 373 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 CSTF1Q05048 431 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 METTL13Q8N6R0 699 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 ZBTB44Q8NCP5 570 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 FBXO18Q8NFZ0 1043 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 KLHL5Q96PQ7 755 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 SPZ1Q9BXG8 430 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 FOXQ1Q9C009 403 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 ZSCAN32Q9NX65 697 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 DACT1Q9NYF0 836 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 GMEB2Q9UKD1 530 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 CLUHO75153 1309 aa12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 MAP1BP46821 2468 aaKnown RBP12.69□□□□□ -0.38
TRAPPC4-213ENST00000533149 IGKV6D-21A0A0A0MT36 114 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 CCDC195A0A1B0GUA6 201 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 BACH1O14867 736 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 F13A1P00488 732 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 VTNP04004 478 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 EIF4BP23588 611 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 MAGEA9P43362 315 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 TRIM29Q14134 588 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 ACAP1Q15027 740 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 ZNF598Q86UK7 904 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 TMEM173Q86WV6 379 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 NETO1Q8TDF5 533 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 MXRA8Q9BRK3 442 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 BAHCC1Q9P281 2608 aa12.68□□□□□ -0.38
TRAPPC4-213ENST00000533149 KANSL1LA0AUZ9 987 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 SLC30A4O14863 429 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 LILRB5O75023 590 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 C22orf31O95567 290 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 GALTP07902 379 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 CNPP09543 421 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 TGM1P22735 817 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 PFKFB3Q16875 520 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 MCTP1Q6DN14 999 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 FERMT3Q86UX7 667 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 MYADMQ96S97 322 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 MAP7D2Q96T17 732 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 OSBPL6Q9BZF3 934 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 MAN1C1Q9NR34 630 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 MRPL17Q9NRX2 175 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 ANGPTL2Q9UKU9 493 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 PCDHA6Q9UN73 950 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 PCDHA8Q9Y5H6 950 aa12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 BAZ2BQ9UIF8 2168 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-213ENST00000533149 ZBTB42B2RXF5 422 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 ANHXE9PGG2 379 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 MAGEB2O15479 319 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 LAMP2P13473 410 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 TMOD1P28289 359 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 NLRP11P59045 1033 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 RESTQ13127 1097 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 FOXD4L6Q3SYB3 417 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 PDXDC2PQ6P474 469 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 GLB1LQ6UWU2 654 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 FOXD4L3Q6VB84 417 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 CLEC17AQ6ZS10 378 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 CKAP2LQ8IYA6 745 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 BBXQ8WY36 941 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 DDX1Q92499 740 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 NELL1Q92832 810 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 FAM126AQ9BYI3 521 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 ZNF302Q9NR11 478 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 RALYQ9UKM9 306 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 KCNJ14Q9UNX9 436 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 CEP131Q9UPN4 1083 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 SSX2IPQ9Y2D8 614 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 ZFP37Q9Y6Q3 630 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 SPTBN2O15020 2390 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 C2orf16Q68DN1 1984 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 WDR87Q6ZQQ6 2873 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 GPR179Q6PRD1 2367 aa12.66□□□□□ -0.38
TRAPPC4-213ENST00000533149 CACNA1IQ9P0X4 2223 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms