RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CAMK1Q14012 370 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 ECM1Q16610 540 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 TWF2Q6IBS0 349 aaKnown RBP14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 MRPL10Q7Z7H8 261 aaKnown RBP14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 KLHL23Q8NBE8 558 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 SPPL3Q8TCT6 385 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 PANK2Q9BZ23 570 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 NSUN3Q9H649 340 aaKnown RBP14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 CWH43Q9H720 699 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 MINDY3Q9H8M7 445 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 FAM105AQ9NUU6 356 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 FAM13BQ9NYF5 915 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 COL4A4P53420 1690 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 E9PMD0 336 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 SLC26A4O43511 780 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 USO1O60763 962 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 CYP11B2P19099 503 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 PLCG1P19174 1290 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 GLRA2P23416 452 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 CAPSQ13938 189 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 CLLU1OSQ5K130 101 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 RRAGBQ5VZM2 374 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 PADI6Q6TGC4 694 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 USP49Q70CQ1 688 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 ABI1Q8IZP0 508 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 LRRC43Q8N309 656 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 PDILTQ8N807 584 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 CNNM3Q8NE01 707 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 ASAP3Q8TDY4 903 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 PGBD4Q96DM1 585 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 CCDC51Q96ER9 411 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 PNMA5Q96PV4 448 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 MRPL9Q9BYD2 267 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 CCSER1Q9C0I3 900 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 BHMT2Q9H2M3 363 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 LZTS1Q9Y250 596 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 MYH15Q9Y2K3 1946 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 CUL9Q8IWT3 2517 aa14.32□□□□□ -0.12
TRAPPC4-212ENST00000533058 BMP1P13497 986 aa14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 STAT6P42226 847 aa14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 PLCB3Q01970 1234 aa14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 NCBP1Q09161 790 aaKnown RBP14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 DHX8Q14562 1220 aaKnown RBP14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 TMEM119Q4V9L6 283 aa14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 AXDND1Q5T1B0 1012 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 SHC4Q6S5L8 630 aa14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 LRRC55Q6ZSA7 311 aa14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 COLGALT1Q8NBJ5 622 aa14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 POLR3FQ9H1D9 316 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 ALG13Q9NP73 1137 aaKnown RBP14.31□□□□□ -0.12
TRAPPC4-212ENST00000533058 NLRC5Q86WI3 1866 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 TSPAN1O60635 241 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 ERLIN2O94905 339 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 EYA4O95677 639 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 IBSPP21815 317 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 PPM1AP35813 382 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 TFF2Q03403 129 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 MBTD1Q05BQ5 628 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 AMHR2Q16671 573 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 TCEAL5Q5H9L2 206 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 HYIQ5T013 277 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 UBXN11Q5T124 520 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 CDCA2Q69YH5 1023 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 ADALQ6DHV7 355 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 PDE12Q6L8Q7 609 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 NOTUMQ6P988 496 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 CCDC73Q6ZRK6 1079 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 MAEAQ7L5Y9 396 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 KCNK18Q7Z418 384 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 RNF169Q8NCN4 708 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 POF1BQ8WVV4 589 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 PPP2R3CQ969Q6 453 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 PABPC5Q96DU9 382 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 PRIMPOLQ96LW4 560 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 UBE2ZQ9H832 354 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 PCDHB2Q9Y5E7 798 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 CNTNAP2Q9UHC6 1331 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 SPTBN5Q9NRC6 3674 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 TTC28Q96AY4 2481 aa14.3□□□□□ -0.12
TRAPPC4-212ENST00000533058 FNDC1Q4ZHG4 1894 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 INO80B-WBP1J3KQ70 363 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 OFD1O75665 1012 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 FGF18O76093 207 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 KRT18P05783 430 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 PLA2G4BP0C869 781 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 DNAJB1P25685 340 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 FAM187BQ17R55 369 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 CTC1Q2NKJ3 1217 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 LEXMQ3ZCV2 418 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 SPOUT1Q5T280 376 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 RESP18Q5W5W9 173 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 KCNT2Q6UVM3 1135 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 GLB1LQ6UWU2 654 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 FSIP1Q8NA03 581 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 HELQQ8TDG4 1101 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 DHX58Q96C10 678 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 ZNF558Q96NG5 402 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 C2orf40Q9H1Z8 148 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 FZD8Q9H461 694 aa14.29□□□□□ -0.12
TRAPPC4-212ENST00000533058 UBN1Q9NPG3 1134 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms