RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 DNAJB1P25685 340 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 UBA7P41226 1012 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 CSPP1Q1MSJ5 1256 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 RINT1Q6NUQ1 792 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 AGMOQ6ZNB7 445 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 C1orf186Q6ZWK4 172 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 DEPTORQ8TB45 409 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 ATXN2LQ8WWM7 1075 aaKnown RBP16.99■□□□□ 0.31
CPSF1-210ENST00000532935 PRIMPOLQ96LW4 560 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 EIF2AQ9BY44 585 aaKnown RBP16.99■□□□□ 0.31
CPSF1-210ENST00000532935 CSRNP2Q9H175 543 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 FZD8Q9H461 694 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 NSUN3Q9H649 340 aaKnown RBP16.99■□□□□ 0.31
CPSF1-210ENST00000532935 COG5Q9UP83 839 aa16.99■□□□□ 0.31
CPSF1-210ENST00000532935 TCF20Q9UGU0 1960 aaKnown RBP16.98■□□□□ 0.31
CPSF1-210ENST00000532935 HIP1RO75146 1068 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 OFD1O75665 1012 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 FGF18O76093 207 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 CSPG5O95196 566 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 SSBP05455 408 aaKnown RBP eCLIP16.98■□□□□ 0.31
CPSF1-210ENST00000532935 NCLP19338 710 aaKnown RBP16.98■□□□□ 0.31
CPSF1-210ENST00000532935 MARCKSP29966 332 aaPredicted RBP16.98■□□□□ 0.31
CPSF1-210ENST00000532935 CEBPZQ03701 1054 aaKnown RBP16.98■□□□□ 0.31
CPSF1-210ENST00000532935 CAMK1Q14012 370 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 FAM187BQ17R55 369 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 TCEAL5Q5H9L2 206 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 NOMO2Q5JPE7 1267 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 KCNT2Q6UVM3 1135 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 THNSL1Q8IYQ7 743 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 DAW1Q8N136 415 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 SYT2Q8N9I0 419 aaPredicted RBP16.98■□□□□ 0.31
CPSF1-210ENST00000532935 SMG8Q8ND04 991 aaKnown RBP16.98■□□□□ 0.31
CPSF1-210ENST00000532935 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 POF1BQ8WVV4 589 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 CALML4Q96GE6 196 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 ZNF558Q96NG5 402 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 KIFC3Q9BVG8 833 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 CCDC113Q9H0I3 377 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 INPP5FQ9Y2H2 1132 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 IPPQ9Y573 584 aa16.98■□□□□ 0.31
CPSF1-210ENST00000532935 CNTNAP2Q9UHC6 1331 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 A0A1B0GUA9 196 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 PRKCBP05771 671 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 PLA2G4BP0C869 781 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 ITGA4P13612 1032 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 GUCY2CP25092 1073 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 PBX3P40426 434 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 SLC12A3P55017 1021 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 MRPS5P82675 430 aaKnown RBP16.97■□□□□ 0.31
CPSF1-210ENST00000532935 UBE3AQ05086 875 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 MAPK7Q13164 816 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 MAPK6Q16659 721 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 SLC27A1Q6PCB7 646 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 CDR2LQ86X02 465 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-210ENST00000532935 HLA-CQ95604 372 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 DRC1Q96MC2 740 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 USP28Q96RU2 1077 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 TIPINQ9BVW5 301 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 TRIM6Q9C030 488 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-210ENST00000532935 RSAD1Q9HA92 442 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 FBXO2Q9UK22 296 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-210ENST00000532935 SRPRBQ9Y5M8 271 aaKnown RBP16.97■□□□□ 0.31
CPSF1-210ENST00000532935 CUL9Q8IWT3 2517 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 TRIP11Q15643 1979 aa16.97■□□□□ 0.31
CPSF1-210ENST00000532935 PDIA4P13667 645 aaKnown RBP16.96■□□□□ 0.31
CPSF1-210ENST00000532935 LIG1P18858 919 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 PPM1AP35813 382 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 EFNA5P52803 228 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 PEX3P56589 373 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 TFF2Q03403 129 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 PRPF4BQ13523 1007 aaKnown RBP16.96■□□□□ 0.31
CPSF1-210ENST00000532935 KARSQ15046 597 aaKnown RBP16.96■□□□□ 0.31
CPSF1-210ENST00000532935 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 RASSF8Q8NHQ8 419 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 URGCPQ8TCY9 931 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 ASB2Q96Q27 587 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 CCSER1Q9C0I3 900 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 UBN1Q9NPG3 1134 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 TBC1D13Q9NVG8 400 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 HES2Q9Y543 173 aa16.96■□□□□ 0.31
CPSF1-210ENST00000532935 MORC2Q9Y6X9 1032 aaPredicted RBP16.96■□□□□ 0.31
CPSF1-210ENST00000532935 TTLL13PA6NNM8 815 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 CCDC169A6NNP5 214 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 ACKR2O00590 384 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 N4BP3O15049 544 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 NPTXRO95502 500 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 EDN1P05305 212 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 PLCG1P19174 1290 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 IRS1P35568 1242 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 NPTX2P47972 431 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 BCAR1P56945 870 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 PLCB3Q01970 1234 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 RNASELQ05823 741 aaKnown RBP16.95■□□□□ 0.3
CPSF1-210ENST00000532935 RAD51AP2Q09MP3 1159 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 DMP1Q13316 513 aaPredicted RBP16.95■□□□□ 0.3
CPSF1-210ENST00000532935 SLC39A14Q15043 492 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 TJAP1Q5JTD0 557 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 SPECC1Q5M775 1068 aa16.95■□□□□ 0.3
CPSF1-210ENST00000532935 HACE1Q8IYU2 909 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms