RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SLC11A1P49279 550 aa19.8■□□□□ 0.76
SMG1-203ENST00000532700 SMAD2Q15796 467 aaKnown RBP19.8■□□□□ 0.76
SMG1-203ENST00000532700 NOMO2Q5JPE7 1267 aa19.8■□□□□ 0.76
SMG1-203ENST00000532700 GJD3Q8N144 294 aa19.8■□□□□ 0.76
SMG1-203ENST00000532700 TBC1D32Q96NH3 1257 aa19.8■□□□□ 0.76
SMG1-203ENST00000532700 POLR3CQ9BUI4 534 aaPredicted RBP19.8■□□□□ 0.76
SMG1-203ENST00000532700 GBP3Q9H0R5 595 aa19.8■□□□□ 0.76
SMG1-203ENST00000532700 TUFT1Q9NNX1 390 aa19.8■□□□□ 0.76
SMG1-203ENST00000532700 CD207Q9UJ71 328 aa19.8■□□□□ 0.76
SMG1-203ENST00000532700 LZTS1Q9Y250 596 aa19.8■□□□□ 0.76
SMG1-203ENST00000532700 C19orf67A6NJJ6 358 aa19.79■□□□□ 0.76
SMG1-203ENST00000532700 F8W810 466 aa19.79■□□□□ 0.76
SMG1-203ENST00000532700 INO80B-WBP1J3KQ70 363 aa19.79■□□□□ 0.76
SMG1-203ENST00000532700 ARF4P18085 180 aaPredicted RBP19.79■□□□□ 0.76
SMG1-203ENST00000532700 RAB27AP51159 221 aa19.79■□□□□ 0.76
SMG1-203ENST00000532700 SMAD4Q13485 552 aaKnown RBP19.79■□□□□ 0.76
SMG1-203ENST00000532700 LLGL2Q6P1M3 1020 aa19.79■□□□□ 0.76
SMG1-203ENST00000532700 SMRP1Q8NCR6 262 aa19.79■□□□□ 0.76
SMG1-203ENST00000532700 BACH2Q9BYV9 841 aa19.79■□□□□ 0.76
SMG1-203ENST00000532700 ENTPD7Q9NQZ7 604 aa19.79■□□□□ 0.76
SMG1-203ENST00000532700 MIOSQ9NXC5 875 aa19.79■□□□□ 0.76
SMG1-203ENST00000532700 IPPQ9Y573 584 aa19.79■□□□□ 0.76
SMG1-203ENST00000532700 ASAP2O43150 1006 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 NCK2O43639 380 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 GALTP07902 379 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 RPA1P27694 616 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 CDC25AP30304 524 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 SSTR3P32745 418 aaPredicted RBP19.78■□□□□ 0.76
SMG1-203ENST00000532700 PTGDRQ13258 359 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 GNL2Q13823 731 aaKnown RBP19.78■□□□□ 0.76
SMG1-203ENST00000532700 MXD4Q14582 209 aaPredicted RBP19.78■□□□□ 0.76
SMG1-203ENST00000532700 CSPP1Q1MSJ5 1256 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 GLB1LQ6UWU2 654 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 EXOC8Q8IYI6 725 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 APOL5Q9BWW9 433 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 MRPL9Q9BYD2 267 aaKnown RBP19.78■□□□□ 0.76
SMG1-203ENST00000532700 CXCL16Q9H2A7 254 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 NXF3Q9H4D5 531 aaKnown RBP19.78■□□□□ 0.76
SMG1-203ENST00000532700 RSAD1Q9HA92 442 aa19.78■□□□□ 0.76
SMG1-203ENST00000532700 DBR1Q9UK59 544 aaKnown RBP19.78■□□□□ 0.76
SMG1-203ENST00000532700 C2orf71A6NGG8 1288 aa19.77■□□□□ 0.76
SMG1-203ENST00000532700 EYA4O95677 639 aa19.77■□□□□ 0.76
SMG1-203ENST00000532700 POMCP01189 267 aa19.77■□□□□ 0.76
SMG1-203ENST00000532700 NCLP19338 710 aaKnown RBP19.77■□□□□ 0.76
SMG1-203ENST00000532700 GJB2P29033 226 aa19.77■□□□□ 0.76
SMG1-203ENST00000532700 FXR2P51116 673 aaKnown RBP eCLIP19.77■□□□□ 0.768e-7■□□□□ 10.7
SMG1-203ENST00000532700 COASYQ13057 564 aa19.77■□□□□ 0.76
SMG1-203ENST00000532700 ORC2Q13416 577 aaPredicted RBP19.77■□□□□ 0.76
SMG1-203ENST00000532700 PUS10Q3MIT2 529 aaKnown RBP19.77■□□□□ 0.76
SMG1-203ENST00000532700 IGSF21Q96ID5 467 aa19.77■□□□□ 0.76
SMG1-203ENST00000532700 ZFP42Q96MM3 310 aa19.77■□□□□ 0.76
SMG1-203ENST00000532700 ZBP1Q9H171 429 aa19.77■□□□□ 0.76
SMG1-203ENST00000532700 USP15Q9Y4E8 981 aaPredicted RBP19.77■□□□□ 0.76
SMG1-203ENST00000532700 PLXNA3P51805 1871 aa19.77■□□□□ 0.76
SMG1-203ENST00000532700 LRRIQ4A6NIV6 560 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 ERLIN2O94905 339 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 XRCC6P12956 609 aaKnown RBP eCLIP19.76■□□□□ 0.75
SMG1-203ENST00000532700 PPM1AP35813 382 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 CCT6AP40227 531 aaKnown RBP19.76■□□□□ 0.75
SMG1-203ENST00000532700 MLH1P40692 756 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 TRAPPC10P48553 1259 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 SYCE2Q6PIF2 218 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 PADI6Q6TGC4 694 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 KCNK18Q7Z418 384 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 ADHFE1Q8IWW8 467 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 IGSF22Q8N9C0 903 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 CCDC43Q96MW1 224 aaKnown RBP19.76■□□□□ 0.75
SMG1-203ENST00000532700 MMTAG2Q9BU76 263 aaKnown RBP19.76■□□□□ 0.75
SMG1-203ENST00000532700 KIFC3Q9BVG8 833 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 APOL6Q9BWW8 343 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.76■□□□□ 0.75
SMG1-203ENST00000532700 CACNG4Q9UBN1 327 aa19.76■□□□□ 0.75
SMG1-203ENST00000532700 PI4K2BG5E9Z4 385 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 ST18O60284 1047 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 SKIP12755 728 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 COL9A1P20849 921 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 POU5F1BQ06416 359 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 TFDP1Q14186 410 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 CDCA2Q69YH5 1023 aaPredicted RBP19.75■□□□□ 0.75
SMG1-203ENST00000532700 KANK3Q6NY19 840 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 TMC7Q7Z402 723 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 VPS52Q8N1B4 723 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 GSTCDQ8NEC7 633 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 NACC1Q96RE7 527 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 GAD1Q99259 594 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 NFKBIZQ9BYH8 718 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 CSRNP2Q9H175 543 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 S1PR5Q9H228 398 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 MARCH5Q9NX47 278 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 LRWD1Q9UFC0 647 aa19.75■□□□□ 0.75
SMG1-203ENST00000532700 NOL7Q9UMY1 257 aaKnown RBP19.75■□□□□ 0.75
SMG1-203ENST00000532700 ARL5CA6NH57 179 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 E9PMD0 336 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 CLASP2O75122 1294 aaKnown RBP19.74■□□□□ 0.75
SMG1-203ENST00000532700 NPTXRO95502 500 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 AKAP5P24588 427 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 ALDH7A1P49419 539 aaKnown RBP19.74■□□□□ 0.75
SMG1-203ENST00000532700 SCNN1GP51170 649 aa19.74■□□□□ 0.75
SMG1-203ENST00000532700 RNASELQ05823 741 aaKnown RBP19.74■□□□□ 0.75
SMG1-203ENST00000532700 MCTP1Q6DN14 999 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms