RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CATSPER4Q7RTX7 472 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 PYROXD1Q8WU10 500 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 EHD4Q9H223 541 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 LCMT1Q9UIC8 334 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 CAV1Q03135 178 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 CCNI2Q6ZMN8 369 aaPredicted RBP16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 CCNYQ8ND76 341 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 TMEM39BQ9GZU3 492 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 FAM49AQ9H0Q0 323 aaPredicted RBP16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 CCDC160A6NGH7 325 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 MT-ND3P03897 115 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 MYBL1P10243 752 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 CA4P22748 312 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 GARSP41250 739 aaKnown RBP16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 CLNS1AP54105 237 aaKnown RBP16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 TNFAIP2Q03169 654 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 DHX34Q14147 1143 aaKnown RBP16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 CCDC137Q6PK04 289 aaKnown RBP16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 CERKQ8TCT0 537 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 GGPS1O95749 300 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 PMS2P54278 862 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 Q3C1V9 767 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 KLHDC7AQ5VTJ3 777 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 MICALL2Q8IY33 904 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 TTC13Q8NBP0 860 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 RNF25Q96BH1 459 aaPredicted RBP16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 KIAA0391O15091 583 aaKnown RBP16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 ZBED1O96006 694 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 KLRC1P26715 233 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 TRIM59Q8IWR1 403 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 RHOT1Q8IXI2 618 aa16.37■□□□□ 0.21
PCDHA3-202ENST00000532566 SLC8A1P32418 973 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 GPC3P51654 580 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 ANKS1AQ92625 1134 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 TACO1Q9BSH4 297 aaKnown RBP16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 MED24O75448 989 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 MAGOHP61326 146 aaKnown RBP16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 TFDP2Q14188 446 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 RHPN2Q8IUC4 686 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 SLC35G2Q8TBE7 412 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 SAYSD1Q9NPB0 183 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 CNOT7Q9UIV1 285 aaKnown RBP16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 TFR2Q9UP52 801 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 SNRNP35Q16560 246 aaKnown RBP16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 CDO1Q16878 200 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 MMEP08473 750 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 TTLL4Q14679 1199 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 LRP10Q7Z4F1 713 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 PRMT6Q96LA8 375 aaPredicted RBP16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 ATP6V1G3Q96LB4 118 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 KCNH7Q9NS40 1196 aa16.36■□□□□ 0.21
PCDHA3-202ENST00000532566 FAM237AA0A1B0GTK4 181 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 PLEKP08567 350 aaPredicted RBP16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 SREBF1P36956 1147 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 EFNA5P52803 228 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 NUGGCQ68CJ6 796 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 ARMCX2Q7L311 632 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 TRIM42Q8IWZ5 723 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 ZNF280CQ8ND82 737 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 OR6B3Q8NGW1 331 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 AGBL1Q96MI9 1066 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 PPP1R12CQ9BZL4 782 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 SEMA6BQ9H3T3 888 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 ACTR5Q9H9F9 607 aaPredicted RBP16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 RBM12Q9NTZ6 932 aaKnown RBP16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 AP3M2P53677 418 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 DUOXA2Q1HG44 320 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 LMBRD2Q68DH5 695 aaPredicted RBP16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 KLHL29Q96CT2 875 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 FBXO28Q9NVF7 368 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 KNDC1Q76NI1 1749 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 C19orf81C9J6K1 198 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 SCP2P22307 547 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 STAT5BP51692 787 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 SPATA24Q86W54 205 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 ZNF710Q8N1W2 664 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 ACER1Q8TDN7 264 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 HSPH1Q92598 858 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 UVRAGQ9P2Y5 699 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 IP6K2Q9UHH9 426 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 GDAP1Q8TB36 358 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 GMCL1Q96IK5 515 aa16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 FAM193BQ96PV7 902 aaPredicted RBP16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 TOPORSQ9NS56 1045 aaPredicted RBP16.35■□□□□ 0.21
PCDHA3-202ENST00000532566 PIK3C2AO00443 1686 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 A0A087X0B3 334 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 PPP2R2AP63151 447 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 RNASELQ05823 741 aaKnown RBP16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 PPP2R5CQ13362 524 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 SNCBQ16143 134 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 SIX6OS1Q8N1H7 587 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 FAM163AQ96GL9 167 aaPredicted RBP16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 NCAPGQ9BPX3 1015 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 CAMTA1Q9Y6Y1 1673 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 GMNNO75496 209 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 GABPAQ06546 454 aa16.34■□□□□ 0.21
PCDHA3-202ENST00000532566 CCDC38Q502W7 563 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms