RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 IFNL1Q8IU54 200 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 UCMAQ8WVF2 138 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 L3MBTL3Q96JM7 780 aaPredicted RBP12.51□□□□□ -0.41
CSRP1-215ENST00000532313 GPR25O00155 361 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 MAN1A1P33908 653 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 NAMPTP43490 491 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 TROAPQ12815 778 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 SENP7Q9BQF6 1050 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 CYP11B2P19099 503 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 VAMP7P51809 220 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 TMEM51Q9NW97 253 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 FAN1Q9Y2M0 1017 aa12.51□□□□□ -0.41
CSRP1-215ENST00000532313 AKAP12Q02952 1782 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 KLRC1P26715 233 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 GRIK1P39086 918 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 PGM5Q15124 567 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 NFRKBQ6P4R8 1299 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 SH3BP1Q9Y3L3 701 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 ANKRD26Q9UPS8 1709 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 LRP6O75581 1613 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 MOXD2PA6NHM9 499 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 ARHGAP6O43182 974 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 TAF6P49848 677 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.41
CSRP1-215ENST00000532313 COPB1P53618 953 aaKnown RBP12.5□□□□□ -0.41
CSRP1-215ENST00000532313 RESP18Q5W5W9 173 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 TTC30AQ86WT1 665 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 PDXKO00764 312 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 IGFBP4P22692 258 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 GUF1Q8N442 669 aaKnown RBP12.5□□□□□ -0.41
CSRP1-215ENST00000532313 SFI1A8K8P3 1242 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 ATP5DP30049 168 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 SGO2Q562F6 1265 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 PPP1R21Q6ZMI0 780 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 A1CFQ9NQ94 594 aaKnown RBP12.5□□□□□ -0.41
CSRP1-215ENST00000532313 SLC4A7Q9Y6M7 1214 aa12.5□□□□□ -0.41
CSRP1-215ENST00000532313 TCRBV5S4A2TA0A5A2 114 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 YDJCA8MPS7 323 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 IKBKBO14920 756 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 VAV2P52735 878 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 SGSM1Q2NKQ1 1148 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 Q4G0T1 1027 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 ZNF280DQ6N043 979 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 MRPS31Q92665 395 aaKnown RBP12.49□□□□□ -0.41
CSRP1-215ENST00000532313 TYW1BQ6NUM6 668 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 CCDC63Q8NA47 563 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 BBOF1Q8ND07 529 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 CLMNQ96JQ2 1002 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 CICQ96RK0 1608 aaPredicted RBP12.49□□□□□ -0.41
CSRP1-215ENST00000532313 CRCPO75575 148 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 CDK17Q00537 523 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 MAATS1Q7Z4T9 603 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 C4orf19Q8IY42 314 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 REPS2Q8NFH8 660 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 APBB2Q92870 758 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 LTN1O94822 1766 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 NFIBO00712 420 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 HSF2BPO75031 334 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 NPTXRO95502 500 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 EVCP57679 992 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 TMEM62Q0P6H9 643 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 LEKR1Q6ZMV7 388 aa12.49□□□□□ -0.41
CSRP1-215ENST00000532313 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.49□□□□□ -0.41
CSRP1-215ENST00000532313 THG1LQ9NWX6 298 aaKnown RBP12.49□□□□□ -0.41
CSRP1-215ENST00000532313 CWC15Q9P013 229 aaKnown RBP12.49□□□□□ -0.41
CSRP1-215ENST00000532313 COL1A1P02452 1464 aaPredicted RBP12.49□□□□□ -0.41
CSRP1-215ENST00000532313 NEMP1O14524 444 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 EIF3DO15371 548 aaKnown RBP eCLIP12.48□□□□□ -0.41
CSRP1-215ENST00000532313 SLC16A3O15427 465 aaKnown RBP12.48□□□□□ -0.41
CSRP1-215ENST00000532313 NFE2Q16621 373 aaPredicted RBP12.48□□□□□ -0.41
CSRP1-215ENST00000532313 PALM2Q8IXS6 379 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 ZNF512Q96ME7 567 aaPredicted RBP12.48□□□□□ -0.41
CSRP1-215ENST00000532313 AGAP1Q9UPQ3 857 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 ABCB4P21439 1286 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 CDC25AP30304 524 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 FIBCD1Q8N539 461 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 ZNF653Q96CK0 615 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 EPSTI1Q96J88 318 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 SLC28A3Q9HAS3 691 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 RGL1Q9NZL6 768 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 TJP2Q9UDY2 1190 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 UTP11Q9Y3A2 253 aaKnown RBP12.48□□□□□ -0.41
CSRP1-215ENST00000532313 EPHB3P54753 998 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 DRP2Q13474 957 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 TATDN1Q6P1N9 297 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 ASNSD1Q9NWL6 643 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 SAMD15Q9P1V8 674 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 TACC3Q9Y6A5 838 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 GOLGA8SH3BPF8 625 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 MTA1Q13330 715 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 CASC4Q6P4E1 433 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 LRRC71Q8N4P6 559 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 FBXL13Q8NEE6 735 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 OXER1Q8TDS5 423 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 AGO4Q9HCK5 861 aaKnown RBP12.48□□□□□ -0.41
CSRP1-215ENST00000532313 MAGED2Q9UNF1 606 aaPredicted RBP12.48□□□□□ -0.41
CSRP1-215ENST00000532313 TLL2Q9Y6L7 1015 aa12.48□□□□□ -0.41
CSRP1-215ENST00000532313 A0A0G2JLL6 359 aaPredicted RBP12.47□□□□□ -0.41
CSRP1-215ENST00000532313 TBKBP1A7MCY6 615 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 THP07101 528 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms