RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 EIF4A3P38919 411 aaKnown RBP8.55□□□□□ -1.04
CTNND1-230ENST00000532245 RBP5P82980 135 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 CLUL1Q15846 466 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 TMEM35BQ8NCS4 154 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 RDM1Q8NG50 284 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 DNAJB3Q8WWF6 145 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 VTA1Q9NP79 307 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 ADAM22Q9P0K1 906 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 FEZ2Q9UHY8 353 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-230ENST00000532245 UBE4BO95155 1302 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 CHD2O14647 1828 aaKnown RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 LCP1P13796 627 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 ELNP15502 786 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 GNA15P30679 374 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 NME3Q13232 169 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 MFSD10Q14728 455 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 PTGISQ16647 500 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 MGAT5BQ3V5L5 792 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 SEZ6Q53EL9 994 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 CEP63Q96MT8 703 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 DEFB118Q96PH6 123 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 OSMRQ99650 979 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 TRIM9Q9C026 710 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 INTS2Q9H0H0 1204 aaKnown RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 RIOX1Q9H6W3 641 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 ANKEF1Q9NU02 776 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 RGPD8O14715 1765 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 SGK1O00141 431 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 FLT3LGP49771 235 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 DNAJC21Q5F1R6 531 aaKnown RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 CEP128Q6ZU80 1094 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 RAB3IL1Q8TBN0 382 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 CD99L2Q8TCZ2 262 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 TNIP3Q96KP6 325 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 CCSER1Q9C0I3 900 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 SPTLC3Q9NUV7 552 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 STRIP2Q9ULQ0 834 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 MYMKA6NI61 221 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 INSRRP14616 1297 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 SAT1P21673 171 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 RECQLP46063 649 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 EVCP57679 992 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 CFAP157Q5JU67 520 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 BTBD8Q5XKL5 378 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 PPP1R2P3Q6NXS1 205 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 CXCL17Q6UXB2 119 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 RIOX2Q8IUF8 465 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 RPUSD2Q8IZ73 545 aaKnown RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 FMR1NBQ8N0W7 255 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 CPB2Q96IY4 423 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 NCAPGQ9BPX3 1015 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 AGO4Q9HCK5 861 aaKnown RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 PTPN22Q9Y2R2 807 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 MAD1L1Q9Y6D9 718 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 BTBD19C9JJ37 291 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 GIPC1O14908 333 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 USP2O75604 605 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 KCNA4P22459 653 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 GRIK4Q16099 956 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 ACCSLQ4AC99 568 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 GJC2Q5T442 439 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 TOGARAM2Q6ZUX3 1019 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 PALM2Q8IXS6 379 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 GUF1Q8N442 669 aaKnown RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 FBXL13Q8NEE6 735 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 C11orf70Q9BRQ4 267 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 ADAMTS1Q9UHI8 967 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 PPP2R2CQ9Y2T4 447 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 SYNGAP1Q96PV0 1343 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 TBC1D12O60347 775 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 AP3M2P53677 418 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 PPARDQ03181 441 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 MAP2K5Q13163 448 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 NFRKBQ6P4R8 1299 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 GDAP1Q8TB36 358 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 PURBQ96QR8 312 aaKnown RBP8.54□□□□□ -1.04
CTNND1-230ENST00000532245 CARD6Q9BX69 1037 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 SAR1BQ9Y6B6 198 aa8.54□□□□□ -1.04
CTNND1-230ENST00000532245 ABCC6O95255 1503 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 IGSF9BQ9UPX0 1349 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 SERPING1P05155 500 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 GHRP10912 638 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 SNX1Q13596 522 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 SNRNP35Q16560 246 aaKnown RBP8.53□□□□□ -1.04
CTNND1-230ENST00000532245 LRRC31Q6UY01 552 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 USP49Q70CQ1 688 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 CYP2W1Q8TAV3 490 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 PRIMPOLQ96LW4 560 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 SENP7Q9BQF6 1050 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 SAMD15Q9P1V8 674 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 MOSPD1Q9UJG1 213 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 OPA1O60313 960 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 CD4P01730 458 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 SGO2Q562F6 1265 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 SAMD3Q8N6K7 520 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 MRFAP1L1Q96HT8 127 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 SIK2Q9H0K1 926 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 CCDC68Q9H2F9 335 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 KCND2Q9NZV8 630 aa8.53□□□□□ -1.04
CTNND1-230ENST00000532245 ANAPC5Q9UJX4 755 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms