RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 CSDE1O75534 798 aaKnown RBP13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 STAG3L1P0CL83 205 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 FGFR4P22455 802 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 SNW1Q13573 536 aaKnown RBP13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 C16orf59Q7L2K0 433 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 HAUS6Q7Z4H7 955 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 HACE1Q8IYU2 909 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 TMEM161BQ8NDZ6 487 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 BICD1Q96G01 975 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 ADAM2Q99965 735 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 ADPGKQ9BRR6 497 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 KIFC3Q9BVG8 833 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 MRPL4Q9BYD3 311 aaKnown RBP13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 GTPBP4Q9BZE4 634 aaKnown RBP13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 TRIM6Q9C030 488 aaPredicted RBP13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 CCDC113Q9H0I3 377 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 BLZF1Q9H2G9 400 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 FZD8Q9H461 694 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 RMND1Q9NWS8 449 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 EXOC7Q9UPT5 735 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 PCDHB13Q9Y5F0 798 aa13.02□□□□□ -0.33
PPFIA1-220ENST00000532024 N4BP3O15049 544 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 TSPAN1O60635 241 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 GCNT3O95395 438 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 MBD3O95983 291 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 WDR5P61964 334 aaKnown RBP13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 COASYQ13057 564 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 CUL4BQ13620 913 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 SHHQ15465 462 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 SLC24A5Q71RS6 500 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 ELOA2Q8IYF1 753 aaPredicted RBP13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 GRAMD1CQ8IYS0 662 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 MYOCDQ8IZQ8 938 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 PHOSPHO2Q8TCD6 241 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 KCNN1Q92952 543 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 OSBPL7Q9BZF2 842 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 ST6GALNAC4Q9H4F1 302 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 RGS18Q9NS28 235 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 LRFN2Q9ULH4 789 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 ADGRA3Q8IWK6 1321 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 TRIOBPQ9H2D6 2365 aa13.01□□□□□ -0.33
PPFIA1-220ENST00000532024 HNRNPDLO14979 420 aaKnown RBP13□□□□□ -0.33
PPFIA1-220ENST00000532024 HOXA2O43364 376 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 KIF20AO95235 890 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 RPN1P04843 607 aaKnown RBP13□□□□□ -0.33
PPFIA1-220ENST00000532024 ATP2A2P16615 1042 aaKnown RBP13□□□□□ -0.33
PPFIA1-220ENST00000532024 SARSP49591 514 aaKnown RBP13□□□□□ -0.33
PPFIA1-220ENST00000532024 PSMD2Q13200 908 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 C9orf50Q5SZB4 431 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 ATF7IP2Q5U623 682 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 SLC27A1Q6PCB7 646 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 ZPBP2Q6X784 338 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 NPAS4Q8IUM7 802 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 SMARCE1Q969G3 411 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 PGBD4Q96DM1 585 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 VWCEQ96DN2 955 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 ZBED2Q9BTP6 218 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 TRAIPQ9BWF2 469 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 TMX1Q9H3N1 280 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 LMBRD1Q9NUN5 540 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 TBX20Q9UMR3 447 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 TET1Q8NFU7 2136 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 MICAL3Q7RTP6 2002 aa13□□□□□ -0.33
PPFIA1-220ENST00000532024 UBE4BO95155 1302 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 ENPP3O14638 875 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 EIF3DO15371 548 aaKnown RBP eCLIP12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 B4GALT5O43286 388 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 ARF4P18085 180 aaPredicted RBP12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 NMT1P30419 496 aaKnown RBP12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 LIG4P49917 911 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 GTF2BQ00403 316 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 DPYDQ12882 1025 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 DSC3Q14574 896 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 AMHR2Q16671 573 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 DCAF4L1Q3SXM0 396 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 RASIP1Q5U651 963 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 ZNF720Q7Z2F6 126 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 MAP4K3Q8IVH8 894 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 SYCP3Q8IZU3 236 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 RSPH1Q8WYR4 309 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 CPB2Q96IY4 423 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 GSDMAQ96QA5 445 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 ACCSQ96QU6 501 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 TCHPQ9BT92 498 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 PRO3102Q9H379 93 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 TMEM206Q9H813 350 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 TMEM161AQ9NX61 479 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 TBC1D7Q9P0N9 293 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 PCDHB7Q9Y5E2 793 aa12.99□□□□□ -0.33
PPFIA1-220ENST00000532024 A0A0U1RQF3 1178 aa12.98□□□□□ -0.33
PPFIA1-220ENST00000532024 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.98□□□□□ -0.33
PPFIA1-220ENST00000532024 A0A1B0GUA9 196 aa12.98□□□□□ -0.33
PPFIA1-220ENST00000532024 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.98□□□□□ -0.33
PPFIA1-220ENST00000532024 MGEA5O60502 916 aa12.98□□□□□ -0.33
PPFIA1-220ENST00000532024 TOM1L1O75674 476 aa12.98□□□□□ -0.33
PPFIA1-220ENST00000532024 EOMESO95936 686 aa12.98□□□□□ -0.33
PPFIA1-220ENST00000532024 IBSPP21815 317 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms