RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 CCDC113Q9H0I3 377 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 CSRNP2Q9H175 543 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 BLOC1S4Q9NUP1 217 aa11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 PRMT7Q9NVM4 692 aaPredicted RBP11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 PIN4Q9Y237 131 aaKnown RBP11.96□□□□□ -0.49
GPATCH4-216ENST00000531900 ZMYM2Q9UBW7 1377 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 PHLPP2Q6ZVD8 1323 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 COL4A4P53420 1690 aaPredicted RBP11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 INO80B-WBP1J3KQ70 363 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 ACKR2O00590 384 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 ERLIN2O94905 339 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 ARF4P18085 180 aaPredicted RBP11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 NCLP19338 710 aaKnown RBP11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 SCP2P22307 547 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 MARCKSP29966 332 aaPredicted RBP11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 DDIT3P35638 169 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 PKP1Q13835 747 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 TIGD5Q53EQ6 642 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 ARSHQ5FYA8 562 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 CLLU1OSQ5K130 101 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 TWF2Q6IBS0 349 aaKnown RBP11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 NOTUMQ6P988 496 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 ZBTB8OSQ8IWT0 167 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 LRRC15Q8TF66 581 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 EPSTI1Q96J88 318 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 CDK5RAP3Q96JB5 506 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 IFT74Q96LB3 600 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 DRC1Q96MC2 740 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 C11orf84Q9BUA3 381 aaPredicted RBP11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 RUSC1Q9BVN2 902 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 LMAN2LQ9H0V9 348 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 TMEM134Q9H6X4 195 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 CWH43Q9H720 699 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 RBM19Q9Y4C8 960 aaKnown RBP11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 PCDHB2Q9Y5E7 798 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 MRPL42Q9Y6G3 142 aaKnown RBP11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 MUC3AQ02505 3323 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 TCHHQ07283 1943 aa11.95□□□□□ -0.5
GPATCH4-216ENST00000531900 CNTNAP2Q9UHC6 1331 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 CARNS1A5YM72 827 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 LRRIQ4A6NIV6 560 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 TBKBP1A7MCY6 615 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 SPTLC2O15270 562 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 HIP1RO75146 1068 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 PLCG1P19174 1290 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 CTNNB1P35222 781 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 GATMP50440 423 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 ZNF131P52739 623 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 BECN1Q14457 450 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 KARSQ15046 597 aaKnown RBP11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 CSPP1Q1MSJ5 1256 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 LRRC55Q6ZSA7 311 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 USP49Q70CQ1 688 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 MAEAQ7L5Y9 396 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 SMG8Q8ND04 991 aaKnown RBP11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 RAD54LQ92698 747 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 PGBD4Q96DM1 585 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 MRPL9Q9BYD2 267 aaKnown RBP11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 UBE2ZQ9H832 354 aaPredicted RBP11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 UBN1Q9NPG3 1134 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 TYW1Q9NV66 732 aaKnown RBP11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 ARHGAP28Q9P2N2 729 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 STK17AQ9UEE5 414 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 RCOR1Q9UKL0 485 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 ODF2LQ9ULJ1 636 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 ZDHHC9Q9Y397 364 aa11.94□□□□□ -0.5
GPATCH4-216ENST00000531900 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 OFD1O75665 1012 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 FGFR1P11362 822 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 NPTX2P47972 431 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 CEBPZQ03701 1054 aaKnown RBP11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 UBE3AQ05086 875 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 STK38Q15208 465 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 MAPK6Q16659 721 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 AXDND1Q5T1B0 1012 aaPredicted RBP11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 SLC27A1Q6PCB7 646 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 AGMOQ6ZNB7 445 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 LRRC43Q8N309 656 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 DEPTORQ8TB45 409 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 LARP4BQ92615 738 aaKnown RBP11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 CLIC6Q96NY7 704 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 NSUN3Q9H649 340 aaKnown RBP11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 AAASQ9NRG9 546 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 CCDC39Q9UFE4 941 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 CFAP45Q9UL16 551 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 PLAGL2Q9UPG8 496 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 ATG2AQ2TAZ0 1938 aa11.93□□□□□ -0.5
GPATCH4-216ENST00000531900 TCF20Q9UGU0 1960 aaKnown RBP11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 B4GALT5O43286 388 aa11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 NCK2O43639 380 aa11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 CUTAO60888 179 aa11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 PLS3P13797 630 aa11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 LAG3P18627 525 aa11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 KCNA5P22460 613 aa11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 TXLNAP40222 546 aa11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 PEX3P56589 373 aa11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 PLCB3Q01970 1234 aa11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 DMP1Q13316 513 aaPredicted RBP11.92□□□□□ -0.5
GPATCH4-216ENST00000531900 CAMK1Q14012 370 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms