RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ZBTB43O43298 467 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 TMOD1P28289 359 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 PUM1Q14671 1186 aaKnown RBP eCLIP10.1□□□□□ -0.79
USF1-210ENST00000531842 NECTIN1Q15223 517 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 UBXN11Q5T124 520 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 TSSK4Q6SA08 328 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 CATSPER4Q7RTX7 472 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 SMAP1Q8IYB5 467 aaPredicted RBP10.1□□□□□ -0.79
USF1-210ENST00000531842 TMTC2Q8N394 836 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 SMG7Q92540 1137 aaKnown RBP10.1□□□□□ -0.79
USF1-210ENST00000531842 GCOM2Q9BZD3 368 aaPredicted RBP10.1□□□□□ -0.79
USF1-210ENST00000531842 WDR6Q9NNW5 1121 aaKnown RBP10.1□□□□□ -0.79
USF1-210ENST00000531842 TBC1D22BQ9NU19 505 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 MIOSQ9NXC5 875 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 DACT1Q9NYF0 836 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 DLL3Q9NYJ7 618 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 IGSF9Q9P2J2 1179 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 WNT16Q9UBV4 365 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 CEP131Q9UPN4 1083 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 SIT1Q9Y3P8 196 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 PCDHB2Q9Y5E7 798 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 NUMBLQ9Y6R0 609 aa10.1□□□□□ -0.79
USF1-210ENST00000531842 TRIP11Q15643 1979 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 DCDC2BA2VCK2 349 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 WDR64B1ANS9 1081 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 DTNBO60941 627 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 SRFP11831 508 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 OR1G1P47890 313 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 NPEPPSP55786 919 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 GPC5P78333 572 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 EXOSC10Q01780 885 aaKnown RBP10.09□□□□□ -0.79
USF1-210ENST00000531842 SNW1Q13573 536 aaKnown RBP10.09□□□□□ -0.79
USF1-210ENST00000531842 HTR4Q13639 388 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 BMS1Q14692 1282 aaKnown RBP10.09□□□□□ -0.79
USF1-210ENST00000531842 PARM1Q6UWI2 310 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 C1orf210Q8IVY1 113 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 RASEFQ8IZ41 740 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 RUBCNQ92622 972 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 FGF14Q92915 247 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 PHKBQ93100 1093 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 FAM167AQ96KS9 214 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 EMILIN2Q9BXX0 1053 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 ARHGEF3Q9NR81 526 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 MRPL17Q9NRX2 175 aaKnown RBP10.09□□□□□ -0.79
USF1-210ENST00000531842 NRBP2Q9NSY0 501 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 SUCLA2Q9P2R7 463 aaPredicted RBP10.09□□□□□ -0.79
USF1-210ENST00000531842 FAN1Q9Y2M0 1017 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 HES2Q9Y543 173 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 SDK1Q7Z5N4 2213 aa10.09□□□□□ -0.79
USF1-210ENST00000531842 DDX11L8A8MPP1 907 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 TDP2O95551 362 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 LAMP2P13473 410 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 ATXN1P54253 815 aaKnown RBP10.08□□□□□ -0.8
USF1-210ENST00000531842 PFKFB3Q16875 520 aaPredicted RBP10.08□□□□□ -0.8
USF1-210ENST00000531842 KIAA0319Q5VV43 1072 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 DCLRE1AQ6PJP8 1040 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 SYNE3Q6ZMZ3 975 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 C15orf39Q6ZRI6 1047 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 PPFIBP1Q86W92 1011 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 REXO1Q8N1G1 1221 aaKnown RBP10.08□□□□□ -0.8
USF1-210ENST00000531842 SMG8Q8ND04 991 aaKnown RBP10.08□□□□□ -0.8
USF1-210ENST00000531842 PJA1Q8NG27 643 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 CCDC136Q96JN2 1154 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 ZFP42Q96MM3 310 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 RPS6KC1Q96S38 1066 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 ESYT1Q9BSJ8 1104 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 MTA3Q9BTC8 594 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 HERC2P3Q9BVR0 1158 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 APOL6Q9BWW8 343 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 EIF2AQ9BY44 585 aaKnown RBP10.08□□□□□ -0.8
USF1-210ENST00000531842 RSAD1Q9HA92 442 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 IFT122Q9HBG6 1241 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 ANO2Q9NQ90 1003 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 CHST12Q9NRB3 414 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 RBM28Q9NW13 759 aaKnown RBP10.08□□□□□ -0.8
USF1-210ENST00000531842 EPS15L1Q9UBC2 864 aa10.08□□□□□ -0.8
USF1-210ENST00000531842 CNOT1A5YKK6 2376 aaKnown RBP10.08□□□□□ -0.8
USF1-210ENST00000531842 FRYQ5TBA9 3013 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 IGKV6-21A0A0C4DH24 114 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 ZBTB39O15060 712 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 TGM5O43548 720 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 GAS7O60861 476 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 GLUD1P00367 558 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 SOD2P04179 222 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 ALDH2P05091 517 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 URODP06132 367 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 SRGAP2CP0DJJ0 459 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 SFPQP23246 707 aaKnown RBP eCLIP10.07□□□□□ -0.8
USF1-210ENST00000531842 HOXA11P31270 313 aaPredicted RBP10.07□□□□□ -0.8
USF1-210ENST00000531842 GLUD2P49448 558 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 SCNN1GP51170 649 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 SETQ01105 290 aaPredicted RBP10.07□□□□□ -0.8
USF1-210ENST00000531842 CSTF1Q05048 431 aaKnown RBP10.07□□□□□ -0.8
USF1-210ENST00000531842 GIT2Q14161 759 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 LPAL2Q16609 132 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 LRCH2Q5VUJ6 765 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 POTEHQ6S545 545 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 PRSS55Q6UWB4 352 aaPredicted RBP10.07□□□□□ -0.8
USF1-210ENST00000531842 ANO5Q75V66 913 aa10.07□□□□□ -0.8
USF1-210ENST00000531842 MIER3Q7Z3K6 550 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms