RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 KCNMB3Q9NPA1 279 aa16.13■□□□□ 0.17
CTSB-221ENST00000531502 COL4A3BPQ9Y5P4 624 aa16.13■□□□□ 0.17
CTSB-221ENST00000531502 DEXIO95424 95 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 EFEMP2O95967 443 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 NPR3P17342 541 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 QARSP47897 775 aaKnown RBP16.12■□□□□ 0.17
CTSB-221ENST00000531502 NONOQ15233 471 aaKnown RBP eCLIP16.12■□□□□ 0.172e-11■■■■■ 33.7
CTSB-221ENST00000531502 INF2Q27J81 1249 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 RUFY3Q7L099 469 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 TRIM22Q8IYM9 498 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 FAM177A1Q8N128 213 aaPredicted RBP16.12■□□□□ 0.17
CTSB-221ENST00000531502 PRPF31Q8WWY3 499 aaKnown RBP16.12■□□□□ 0.17
CTSB-221ENST00000531502 TMEM175Q9BSA9 504 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 RSAD1Q9HA92 442 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 ZSWIM6Q9HCJ5 1215 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 DDX25Q9UHL0 483 aaKnown RBP16.12■□□□□ 0.17
CTSB-221ENST00000531502 SPTBN4Q9H254 2564 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 FAM186AA6NE01 2351 aa16.12■□□□□ 0.17
CTSB-221ENST00000531502 PRR23AA6NEV1 266 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 NRP1O14786 923 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 ALDH2P05091 517 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 KLRC2P26717 231 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 GALNT17Q6IS24 598 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 C15orf39Q6ZRI6 1047 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 SRGAP1Q7Z6B7 1085 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 URGCPQ8TCY9 931 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 TMEM143Q96AN5 459 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 ZNF274Q96GC6 653 aaPredicted RBP16.11■□□□□ 0.17
CTSB-221ENST00000531502 EMILIN2Q9BXX0 1053 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 MARCH5Q9NX47 278 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 STK39Q9UEW8 545 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 FAN1Q9Y2M0 1017 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 CNTNAP2Q9UHC6 1331 aa16.11■□□□□ 0.17
CTSB-221ENST00000531502 VPS13AQ96RL7 3174 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 INPPL1O15357 1258 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 PI15O43692 258 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 N4BP1O75113 896 aaKnown RBP16.1■□□□□ 0.17
CTSB-221ENST00000531502 POMCP01189 267 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 SSBP05455 408 aaKnown RBP eCLIP16.1■□□□□ 0.17
CTSB-221ENST00000531502 P4HBP07237 508 aaKnown RBP16.1■□□□□ 0.17
CTSB-221ENST00000531502 SRGAP2CP0DJJ0 459 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 NCLP19338 710 aaKnown RBP16.1■□□□□ 0.17
CTSB-221ENST00000531502 LAMTOR4Q0VGL1 99 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 TDGQ13569 410 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 CCDC149Q6ZUS6 474 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 OTOP3Q7RTS5 596 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 TAS1R1Q7RTX1 841 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 KRT25Q7Z3Z0 450 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 RNF168Q8IYW5 571 aaPredicted RBP16.1■□□□□ 0.17
CTSB-221ENST00000531502 SMG8Q8ND04 991 aaKnown RBP16.1■□□□□ 0.17
CTSB-221ENST00000531502 SLC7A3Q8WY07 619 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 HAS1Q92839 578 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 ACSF2Q96CM8 615 aaPredicted RBP16.1■□□□□ 0.17
CTSB-221ENST00000531502 CEP170P1Q96L14 293 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 FAM20AQ96MK3 541 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 LARP6Q9BRS8 491 aaKnown RBP16.1■□□□□ 0.17
CTSB-221ENST00000531502 KCNK12Q9HB15 430 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 KANSL3Q9P2N6 904 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 DUSP12Q9UNI6 340 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 PPME1Q9Y570 386 aa16.1■□□□□ 0.17
CTSB-221ENST00000531502 SOD2P04179 222 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 AOC1P19801 751 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 LETM2Q2VYF4 491 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 PPP4R3AQ6IN85 833 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 C4orf19Q8IY42 314 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 COLGALT2Q8IYK4 626 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 CMASQ8NFW8 434 aaPredicted RBP16.09■□□□□ 0.17
CTSB-221ENST00000531502 PSPC1Q8WXF1 523 aaKnown RBP16.09■□□□□ 0.17
CTSB-221ENST00000531502 RPS6KC1Q96S38 1066 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 PHF20Q9BVI0 1012 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 HERC2P3Q9BVR0 1158 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 RHOBTB2Q9BYZ6 727 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 RNF39Q9H2S5 420 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 MFSD1Q9H3U5 465 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 MRPL17Q9NRX2 175 aaKnown RBP16.09■□□□□ 0.17
CTSB-221ENST00000531502 KCNJ14Q9UNX9 436 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 ARID2Q68CP9 1835 aa16.09■□□□□ 0.17
CTSB-221ENST00000531502 DOCK8Q8NF50 2099 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 CPLX1O14810 134 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 ZBTB39O15060 712 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 DKC1O60832 514 aaKnown RBP eCLIP16.08■□□□□ 0.164e-14■■■■■ 34
CTSB-221ENST00000531502 REC8O95072 547 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 PAPLNO95428 1278 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 RFC5P40937 340 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 DSC1Q08554 894 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 EPHA7Q15375 998 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 KIAA0319Q5VV43 1072 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 FERMT3Q86UX7 667 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 EXOC8Q8IYI6 725 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 FLCNQ8NFG4 579 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 FAM193BQ96PV7 902 aaPredicted RBP16.08■□□□□ 0.16
CTSB-221ENST00000531502 LXNQ9BS40 222 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 MAN1C1Q9NR34 630 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 MIOSQ9NXC5 875 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 IPPQ9Y573 584 aa16.08■□□□□ 0.16
CTSB-221ENST00000531502 TBX3O15119 743 aa16.07■□□□□ 0.16
CTSB-221ENST00000531502 TEX28O15482 410 aa16.07■□□□□ 0.16
CTSB-221ENST00000531502 ASAP2O43150 1006 aa16.07■□□□□ 0.16
CTSB-221ENST00000531502 EPB41L2O43491 1005 aaKnown RBP16.07■□□□□ 0.16
CTSB-221ENST00000531502 YWHABP31946 246 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms