RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 NDC1Q9BTX1 674 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 WDR11Q9BZH6 1224 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 IGSF5Q9NSI5 407 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 TRPM5Q9NZQ8 1165 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 NRP1O14786 923 aa6.85□□□□□ -1.31
PTPRK-220ENST00000531466 DNAJC6O75061 913 aa6.85□□□□□ -1.31
PTPRK-220ENST00000531466 USP14P54578 494 aa6.85□□□□□ -1.31
PTPRK-220ENST00000531466 ZNF460Q14592 562 aa6.85□□□□□ -1.31
PTPRK-220ENST00000531466 COLEC12Q5KU26 742 aa6.85□□□□□ -1.31
PTPRK-220ENST00000531466 KIAA1841Q6NSI8 718 aa6.85□□□□□ -1.31
PTPRK-220ENST00000531466 PHYKPLQ8IUZ5 450 aa6.85□□□□□ -1.31
PTPRK-220ENST00000531466 LILRA3Q8N6C8 439 aaPredicted RBP6.85□□□□□ -1.31
PTPRK-220ENST00000531466 GLB1L3Q8NCI6 653 aaPredicted RBP6.85□□□□□ -1.31
PTPRK-220ENST00000531466 SUPT20HQ8NEM7 779 aa6.85□□□□□ -1.31
PTPRK-220ENST00000531466 CLUHP3Q96NS8 147 aa6.85□□□□□ -1.31
PTPRK-220ENST00000531466 HIRIP3Q9BW71 556 aaPredicted RBP6.85□□□□□ -1.31
PTPRK-220ENST00000531466 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPRK-220ENST00000531466 MAFGO15525 162 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 OPA1O60313 960 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 NCR1O76036 304 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 CD38P28907 300 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 RBM25P49756 843 aaKnown RBP6.84□□□□□ -1.31
PTPRK-220ENST00000531466 TAP1Q03518 808 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 ADCY1Q08828 1119 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 PIK3R6Q5UE93 754 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 RD3Q7Z3Z2 195 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 FAM83AQ86UY5 434 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 RTF1Q92541 710 aaKnown RBP6.84□□□□□ -1.31
PTPRK-220ENST00000531466 LSM14BQ9BX40 385 aaKnown RBP6.84□□□□□ -1.31
PTPRK-220ENST00000531466 R3HDMLQ9H3Y0 253 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 PRDM13Q9H4Q3 707 aa6.84□□□□□ -1.31
PTPRK-220ENST00000531466 PLD2O14939 933 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 C2orf27AQ580R0 203 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 HOMEZQ8IX15 550 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 LCORLQ8N3X6 602 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 HIST1H2AHQ96KK5 128 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 HIST1H2AJQ99878 128 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 PDCD2LQ9BRP1 358 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 AKIP1Q9NQ31 210 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 TOMM22Q9NS69 142 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 B4GALT6Q9UBX8 382 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 HDAC5Q9UQL6 1122 aa6.83□□□□□ -1.32
PTPRK-220ENST00000531466 TMEM200CA6NKL6 621 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 DNAJC8O75937 253 aaPredicted RBP6.82□□□□□ -1.32
PTPRK-220ENST00000531466 PCDH8O95206 1070 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 NDUFA10O95299 355 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 ASLP04424 464 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 CD69Q07108 199 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 METTL24Q5JXM2 366 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 IQSEC1Q6DN90 963 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 CCDC62Q6P9F0 684 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 GDF7Q7Z4P5 450 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 GLCCI1Q86VQ1 547 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 XYLT1Q86Y38 959 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 CMTR2Q8IYT2 770 aaKnown RBP6.82□□□□□ -1.32
PTPRK-220ENST00000531466 UNC5BQ8IZJ1 945 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 IL17RAQ96F46 866 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 PODXL2Q9NZ53 605 aa6.82□□□□□ -1.32
PTPRK-220ENST00000531466 SPATA31A6Q5VVP1 1343 aa6.81□□□□□ -1.32
PTPRK-220ENST00000531466 LEFTY2O00292 366 aa6.81□□□□□ -1.32
PTPRK-220ENST00000531466 RNASET2O00584 256 aaKnown RBP6.81□□□□□ -1.32
PTPRK-220ENST00000531466 MRPL49Q13405 166 aaKnown RBP6.81□□□□□ -1.32
PTPRK-220ENST00000531466 CREB3L3Q68CJ9 461 aa6.81□□□□□ -1.32
PTPRK-220ENST00000531466 INTS7Q9NVH2 962 aaKnown RBP6.81□□□□□ -1.32
PTPRK-220ENST00000531466 CBX4O00257 560 aa6.8□□□□□ -1.32
PTPRK-220ENST00000531466 RNASE9P60153 205 aaKnown RBP6.8□□□□□ -1.32
PTPRK-220ENST00000531466 ARHGEF19Q8IW93 802 aa6.8□□□□□ -1.32
PTPRK-220ENST00000531466 PPP1R14CQ8TAE6 165 aa6.8□□□□□ -1.32
PTPRK-220ENST00000531466 TEX101Q9BY14 249 aa6.8□□□□□ -1.32
PTPRK-220ENST00000531466 RSAD1Q9HA92 442 aa6.8□□□□□ -1.32
PTPRK-220ENST00000531466 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRK-220ENST00000531466 SYBUQ9NX95 663 aa6.8□□□□□ -1.32
PTPRK-220ENST00000531466 H2AFY2Q9P0M6 372 aaPredicted RBP6.8□□□□□ -1.32
PTPRK-220ENST00000531466 CHST2Q9Y4C5 530 aa6.8□□□□□ -1.32
PTPRK-220ENST00000531466 SPO11Q9Y5K1 396 aa6.8□□□□□ -1.32
PTPRK-220ENST00000531466 COX11Q9Y6N1 276 aa6.8□□□□□ -1.32
PTPRK-220ENST00000531466 LY86O95711 162 aa6.79□□□□□ -1.32
PTPRK-220ENST00000531466 GZMKP49863 264 aa6.79□□□□□ -1.32
PTPRK-220ENST00000531466 WNT3AP56704 352 aa6.79□□□□□ -1.32
PTPRK-220ENST00000531466 FBXO42Q6P3S6 717 aa6.79□□□□□ -1.32
PTPRK-220ENST00000531466 DOK3Q7L591 496 aa6.79□□□□□ -1.32
PTPRK-220ENST00000531466 LILRB2Q8N423 598 aa6.79□□□□□ -1.32
PTPRK-220ENST00000531466 CAVIN3Q969G5 261 aa6.79□□□□□ -1.32
PTPRK-220ENST00000531466 DCLRE1CQ96SD1 692 aaKnown RBP6.79□□□□□ -1.32
PTPRK-220ENST00000531466 ZMAT4Q9H898 229 aa6.79□□□□□ -1.32
PTPRK-220ENST00000531466 OXSMQ9NWU1 459 aa6.79□□□□□ -1.32
PTPRK-220ENST00000531466 PCDHB6Q9Y5E3 794 aa6.79□□□□□ -1.32
PTPRK-220ENST00000531466 EPN1Q9Y6I3 576 aaPredicted RBP6.79□□□□□ -1.32
PTPRK-220ENST00000531466 MYPNQ86TC9 1320 aa6.78□□□□□ -1.32
PTPRK-220ENST00000531466 UNC119BA6NIH7 251 aa6.78□□□□□ -1.32
PTPRK-220ENST00000531466 TYRP1P17643 537 aa6.78□□□□□ -1.32
PTPRK-220ENST00000531466 AVPR1BP47901 424 aa6.78□□□□□ -1.32
PTPRK-220ENST00000531466 PTH2RP49190 550 aa6.78□□□□□ -1.32
PTPRK-220ENST00000531466 DUSP2Q05923 314 aa6.78□□□□□ -1.32
PTPRK-220ENST00000531466 MSL3Q8N5Y2 521 aaKnown RBP6.78□□□□□ -1.32
PTPRK-220ENST00000531466 SPON1Q9HCB6 807 aa6.78□□□□□ -1.32
PTPRK-220ENST00000531466 CCDC9Q9Y3X0 531 aaKnown RBP6.78□□□□□ -1.32
PTPRK-220ENST00000531466 GAGE12BA1L429 117 aa6.77□□□□□ -1.33
PTPRK-220ENST00000531466 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
PTPRK-220ENST00000531466 PRR5-ARHGAP8B1AHC4 643 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms