RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 SLC22A17Q8WUG5 538 aa14.31□□□□□ -0.12
TM9SF1-211ENST00000531406 DYDC2Q96IM9 177 aa14.31□□□□□ -0.12
TM9SF1-211ENST00000531406 VN1R3Q9BXE9 311 aa14.31□□□□□ -0.12
TM9SF1-211ENST00000531406 ZSWIM4Q9H7M6 989 aa14.31□□□□□ -0.12
TM9SF1-211ENST00000531406 BMP2KQ9NSY1 1161 aaPredicted RBP14.31□□□□□ -0.12
TM9SF1-211ENST00000531406 DZANK1Q9NVP4 752 aa14.31□□□□□ -0.12
TM9SF1-211ENST00000531406 ORC3Q9UBD5 711 aaPredicted RBP14.31□□□□□ -0.12
TM9SF1-211ENST00000531406 MYH9P35579 1960 aaKnown RBP14.31□□□□□ -0.12
TM9SF1-211ENST00000531406 FAM205CA6NFA0 338 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 GAS2O43903 313 aaKnown RBP14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 BAG4O95429 457 aaKnown RBP14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 WEE2P0C1S8 567 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 EPCAMP16422 314 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 MTHFRP42898 656 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 CTTNQ14247 550 aaKnown RBP14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 EMC2Q15006 297 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 C8orf34Q49A92 452 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 XKR9Q5GH70 373 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 RARS2Q5T160 578 aaKnown RBP14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 KANK3Q6NY19 840 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 ZBTB33Q86T24 672 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 KREMEN2Q8NCW0 462 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 URGCPQ8TCY9 931 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 TCP11Q8WWU5 503 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 WASF1Q92558 559 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 RIPOR3Q96MK2 946 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 TECTAO75443 2155 aa14.3□□□□□ -0.12
TM9SF1-211ENST00000531406 C2CD4DB7Z1M9 353 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 ASAP2O43150 1006 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 DDHD2O94830 711 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 SLITRK3O94933 977 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 ALDH2P05091 517 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 FDPSP14324 419 aaKnown RBP14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 AFF1P51825 1210 aaKnown RBP14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 AK2P54819 239 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 PTPN5P54829 565 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 ANAPC15P60006 121 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 CYP4A11Q02928 519 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 NR5A1Q13285 461 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 ANKRD1Q15327 319 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 PTPN14Q15678 1187 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 ATAT1Q5SQI0 421 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 FERMT3Q86UX7 667 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 TPH2Q8IWU9 490 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 SLFN12Q8IYM2 578 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 RNF149Q8NC42 400 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 TNFRSF25Q93038 417 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 PRRX2Q99811 253 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 RSAD1Q9HA92 442 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 KANSL3Q9P2N6 904 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 STK39Q9UEW8 545 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 CNTNAP2Q9UHC6 1331 aa14.29□□□□□ -0.12
TM9SF1-211ENST00000531406 NCLP19338 710 aaKnown RBP14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 KRT2P35908 639 aa14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 VCPP55072 806 aaKnown RBP14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 KIAA1841Q6NSI8 718 aa14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 PPFIBP1Q86W92 1011 aa14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 NECAB1Q8N987 351 aa14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 SMG8Q8ND04 991 aaKnown RBP14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 KLHL5Q96PQ7 755 aa14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 HSD17B14Q9BPX1 270 aa14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 EIF2AK1Q9BQI3 630 aaKnown RBP14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 TMEM175Q9BSA9 504 aa14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 BRMS1Q9HCU9 246 aa14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 XPNPEP1Q9NQW7 623 aa14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 FAN1Q9Y2M0 1017 aa14.28□□□□□ -0.12
TM9SF1-211ENST00000531406 NRP1O14786 923 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 TSPAN1O60635 241 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 LILRB3O75022 631 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 LYPLA2O95372 231 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 PDGFBP01127 241 aaPredicted RBP14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 POMCP01189 267 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 ITGA4P13612 1032 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 AVPR2P30518 371 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 PTENP60484 403 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 TCF15Q12870 199 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 MXD4Q14582 209 aaPredicted RBP14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 PCBP1Q15365 356 aaKnown RBP eCLIP14.27□□□□□ -0.139e-6■■■■■ 29.7
TM9SF1-211ENST00000531406 CABP7Q86V35 215 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 UBALD2Q8IYN6 164 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 ZDHHC14Q8IZN3 488 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 CNNM3Q8NE01 707 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 CCDC51Q96ER9 411 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 FAM193BQ96PV7 902 aaPredicted RBP14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 PHOX2BQ99453 314 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 MTRQ99707 1265 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 EMILIN2Q9BXX0 1053 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 EIF2AQ9BY44 585 aaKnown RBP14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 BACH2Q9BYV9 841 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 RNF39Q9H2S5 420 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 UPF2Q9HAU5 1272 aaKnown RBP14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 UBN1Q9NPG3 1134 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 PCDHA12Q9UN75 941 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 SORCS3Q9UPU3 1222 aa14.27□□□□□ -0.13
TM9SF1-211ENST00000531406 INPPL1O15357 1258 aa14.26□□□□□ -0.13
TM9SF1-211ENST00000531406 ERLIN2O94905 339 aa14.26□□□□□ -0.13
TM9SF1-211ENST00000531406 BRD1O95696 1058 aa14.26□□□□□ -0.13
TM9SF1-211ENST00000531406 SSBP05455 408 aaKnown RBP eCLIP14.26□□□□□ -0.13
TM9SF1-211ENST00000531406 CNPP09543 421 aaKnown RBP14.26□□□□□ -0.13
TM9SF1-211ENST00000531406 KLRC2P26717 231 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms