RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 NOTUMQ6P988 496 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 TMEM184AQ6ZMB5 413 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 ADGRD2Q7Z7M1 963 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 RNF169Q8NCN4 708 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 PRIMPOLQ96LW4 560 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 RAB34Q9BZG1 259 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 UBN1Q9NPG3 1134 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 BMP2KQ9NSY1 1161 aaPredicted RBP13.39□□□□□ -0.27
COPB1-206ENST00000529210 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 STK39Q9UEW8 545 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 PCDHB6Q9Y5E3 794 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 MEIS3P2A8K0S8 358 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 MBTPS2O43462 519 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 USO1O60763 962 aaKnown RBP13.38□□□□□ -0.27
COPB1-206ENST00000529210 ERLIN2O94905 339 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 GLP2RO95838 553 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 IL9P15248 144 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 CYP11B2P19099 503 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 GJB2P29033 226 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 GTF2F1P35269 517 aaKnown RBP eCLIP13.38□□□□□ -0.273e-9■■■■■ 105.7
COPB1-206ENST00000529210 ALDH7A1P49419 539 aaKnown RBP13.38□□□□□ -0.27
COPB1-206ENST00000529210 BCAR1P56945 870 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 DLX2Q07687 328 aaPredicted RBP13.38□□□□□ -0.27
COPB1-206ENST00000529210 SMAD4Q13485 552 aaKnown RBP13.38□□□□□ -0.27
COPB1-206ENST00000529210 POTEGQ6S5H5 508 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 KCTD17Q8N5Z5 321 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 SMG8Q8ND04 991 aaKnown RBP13.38□□□□□ -0.27
COPB1-206ENST00000529210 LPPQ93052 612 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 CSRNP2Q9H175 543 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 POLR3FQ9H1D9 316 aaPredicted RBP13.38□□□□□ -0.27
COPB1-206ENST00000529210 NRDE2Q9H7Z3 1164 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 RSAD1Q9HA92 442 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 CLEC1BQ9P126 229 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 KANSL3Q9P2N6 904 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.38□□□□□ -0.27
COPB1-206ENST00000529210 IRAK3Q9Y616 596 aa13.38□□□□□ -0.27
COPB1-206ENST00000529210 A0A1B0GUA9 196 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 C19orf67A6NJJ6 358 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 INO80B-WBP1J3KQ70 363 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 GALTP07902 379 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 ARF4P18085 180 aaPredicted RBP13.37□□□□□ -0.27
COPB1-206ENST00000529210 NRIP1P48552 1158 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 ATP2C1P98194 919 aaPredicted RBP13.37□□□□□ -0.27
COPB1-206ENST00000529210 NCBP1Q09161 790 aaKnown RBP13.37□□□□□ -0.27
COPB1-206ENST00000529210 CUL4AQ13619 759 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 NBR1Q14596 966 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 ECM1Q16610 540 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 SMRP1Q8NCR6 262 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 TMEM175Q9BSA9 504 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 FZD8Q9H461 694 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 TLE6Q9H808 572 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 LRWD1Q9UFC0 647 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 CD207Q9UJ71 328 aa13.37□□□□□ -0.27
COPB1-206ENST00000529210 C5orf42Q9H799 3197 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 ARHGEF35A5YM69 484 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 LINC01565O15544 149 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 CCT6AP40227 531 aaKnown RBP13.36□□□□□ -0.27
COPB1-206ENST00000529210 PBX3P40426 434 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 NAMPTP43490 491 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 NDUFV1P49821 464 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 ZP2Q05996 745 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 HYIQ5T013 277 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 ARL6IP4Q66PJ3 421 aaKnown RBP13.36□□□□□ -0.27
COPB1-206ENST00000529210 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 DDX53Q86TM3 631 aaKnown RBP13.36□□□□□ -0.27
COPB1-206ENST00000529210 ADHFE1Q8IWW8 467 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 GJD3Q8N144 294 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 URGCPQ8TCY9 931 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 TMEM169Q96HH4 297 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 IGSF21Q96ID5 467 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 TCF25Q9BQ70 676 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 ZBP1Q9H171 429 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 C2orf40Q9H1Z8 148 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 IGFLR1Q9H665 355 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 CD320Q9NPF0 282 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 GPRC5CQ9NQ84 441 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 PRMT7Q9NVM4 692 aaPredicted RBP13.36□□□□□ -0.27
COPB1-206ENST00000529210 GIT1Q9Y2X7 761 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 IPPQ9Y573 584 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 PCDHGC5Q9Y5F6 944 aa13.36□□□□□ -0.27
COPB1-206ENST00000529210 A0A087WWV3 80 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.27
COPB1-206ENST00000529210 DSC1Q08554 894 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 GIT2Q14161 759 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 SMC1AQ14683 1233 aaKnown RBP13.35□□□□□ -0.27
COPB1-206ENST00000529210 PPP2R5AQ15172 486 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 IL17AQ16552 155 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 PLPP4Q5VZY2 271 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 SLC27A1Q6PCB7 646 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 DTHD1Q6ZMT9 781 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 TMEM173Q86WV6 379 aaPredicted RBP13.35□□□□□ -0.27
COPB1-206ENST00000529210 MRPL43Q8N983 215 aaKnown RBP13.35□□□□□ -0.27
COPB1-206ENST00000529210 VN1R2Q8NFZ6 395 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 MICAL1Q8TDZ2 1067 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 KIFAP3Q92845 792 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 MMTAG2Q9BU76 263 aaKnown RBP13.35□□□□□ -0.27
COPB1-206ENST00000529210 C1QTNF1Q9BXJ1 281 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 EIF2AQ9BY44 585 aaKnown RBP13.35□□□□□ -0.27
COPB1-206ENST00000529210 ENTPD7Q9NQZ7 604 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 KIAA1024Q9UPX6 916 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms