RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 MAPK7Q13164 816 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 MAPK6Q16659 721 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 ZC2HC1CQ53FD0 456 aaPredicted RBP9.26□□□□□ -0.93
RDX-205ENST00000528556 CT47A1Q5JQC4 288 aaPredicted RBP9.26□□□□□ -0.93
RDX-205ENST00000528556 CCSAPQ6IQ19 270 aaPredicted RBP9.26□□□□□ -0.93
RDX-205ENST00000528556 GDF6Q6KF10 455 aaPredicted RBP9.26□□□□□ -0.93
RDX-205ENST00000528556 C11orf57Q6ZUT1 292 aaPredicted RBP9.26□□□□□ -0.93
RDX-205ENST00000528556 ZNF720Q7Z2F6 126 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 KSR1Q8IVT5 923 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 NME8Q8N427 588 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 GUF1Q8N442 669 aaKnown RBP9.26□□□□□ -0.93
RDX-205ENST00000528556 AOPEPQ8N6M6 819 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 ANKRD20A12PQ8NF67 263 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 SPIRE2Q8WWL2 714 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 ANP32BQ92688 251 aaKnown RBP9.26□□□□□ -0.93
RDX-205ENST00000528556 P2RX5Q93086 422 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 HVCN1Q96D96 273 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 TCHPQ9BT92 498 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 KIFC3Q9BVG8 833 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 GCOM2Q9BZD3 368 aaPredicted RBP9.26□□□□□ -0.93
RDX-205ENST00000528556 C11orf49Q9H6J7 331 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 UBE4BO95155 1302 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 MROH7Q68CQ1 1323 aa9.26□□□□□ -0.93
RDX-205ENST00000528556 A0A087WZ62 844 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 IGKV6-21A0A0C4DH24 114 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 DCDC2CA8MYV0 355 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 EIF3DO15371 548 aaKnown RBP eCLIP9.25□□□□□ -0.93
RDX-205ENST00000528556 PQBP1O60828 265 aaKnown RBP9.25□□□□□ -0.93
RDX-205ENST00000528556 TPM2P07951 284 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 CTSHP09668 335 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 RPL13P26373 211 aaKnown RBP9.25□□□□□ -0.93
RDX-205ENST00000528556 ERCC5P28715 1186 aaPredicted RBP9.25□□□□□ -0.93
RDX-205ENST00000528556 NCKAP1LP55160 1127 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 MYL5Q02045 173 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 PTK7Q13308 1070 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 DRP2Q13474 957 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 CAPSQ13938 189 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 KNOP1Q1ED39 458 aaKnown RBP9.25□□□□□ -0.93
RDX-205ENST00000528556 KIZQ2M2Z5 673 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 MARCH8Q5T0T0 291 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 RUFY4Q6ZNE9 571 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 NECAB2Q7Z6G3 386 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 ZNF410Q86VK4 478 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 DAW1Q8N136 415 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 ADSSL1Q8N142 457 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 ANKLE1Q8NAG6 615 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 TTC13Q8NBP0 860 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 KIAA0895Q8NCT3 520 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 GOLGA5Q8TBA6 731 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 FAM200AQ8TCP9 573 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 BSNDQ8WZ55 320 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 KCNK17Q96T54 332 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 FDXACB1Q9BRP7 624 aaPredicted RBP9.25□□□□□ -0.93
RDX-205ENST00000528556 CBX8Q9HC52 389 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 PDLIM7Q9NR12 457 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 TRMT13Q9NUP7 481 aaKnown RBP9.25□□□□□ -0.93
RDX-205ENST00000528556 RWDD2AQ9UIY3 292 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 ARID2Q68CP9 1835 aa9.25□□□□□ -0.93
RDX-205ENST00000528556 MBLAC1A4D2B0 266 aaPredicted RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 HNRNPDLO14979 420 aaKnown RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 CETN3O15182 167 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 PRKCBP05771 671 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 HARSP12081 509 aaKnown RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 BMP6P22004 513 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 CCNE1P24864 410 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 GPC3P51654 580 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 MRPS6P82932 125 aaKnown RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 LRRC63Q05C16 580 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 BFSP2Q13515 415 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 PRPF4BQ13523 1007 aaKnown RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 HSP90AA2PQ14568 343 aaPredicted RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 CCDC40Q4G0X9 1142 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 ARMCX5Q6P1M9 558 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 CATSPER4Q7RTX7 472 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 APBB1IPQ7Z5R6 666 aaPredicted RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 SESTD1Q86VW0 696 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 FAM114A1Q8IWE2 563 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 KIAA0319LQ8IZA0 1049 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 CSGALNACT2Q8N6G5 542 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 GLIS3Q8NEA6 775 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 ZNF507Q8TCN5 953 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 SCFD1Q8WVM8 642 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 PAWRQ96IZ0 340 aaKnown RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 CEP89Q96ST8 783 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 OSMRQ99650 979 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 BPIFA3Q9BQP9 254 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 NTPCRQ9BSD7 190 aaKnown RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 FUCA2Q9BTY2 467 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 MRPL4Q9BYD3 311 aaKnown RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 GBP3Q9H0R5 595 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 TRPV6Q9H1D0 765 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 PRMT7Q9NVM4 692 aaPredicted RBP9.24□□□□□ -0.93
RDX-205ENST00000528556 ANKFY1Q9P2R3 1169 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 TBX20Q9UMR3 447 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 ATP11BQ9Y2G3 1177 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 TRPV2Q9Y5S1 764 aa9.24□□□□□ -0.93
RDX-205ENST00000528556 WDR81Q562E7 1941 aa9.23□□□□□ -0.93
RDX-205ENST00000528556 KAT6AQ92794 2004 aa9.23□□□□□ -0.93
RDX-205ENST00000528556 TRIM49BA6NDI0 452 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms