RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 ZP2Q05996 745 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 SMC1AQ14683 1233 aaKnown RBP15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 SMAD2Q15796 467 aaKnown RBP15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 DUSP6Q16828 381 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 NOTUMQ6P988 496 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 POTEGQ6S5H5 508 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 MAEAQ7L5Y9 396 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 ADHFE1Q8IWW8 467 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 MCPH1Q8NEM0 835 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 CCDC51Q96ER9 411 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 MSLNLQ96KJ4 702 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 POLR3CQ9BUI4 534 aaPredicted RBP15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 RSAD1Q9HA92 442 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 CLEC1BQ9P126 229 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 ARHGEF35A5YM69 484 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 LRRIQ4A6NIV6 560 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 OFD1O75665 1012 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 GLRA2P23416 452 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 RPA1P27694 616 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 HOXA11P31270 313 aaPredicted RBP15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 ARL2P36404 184 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 MBTD1Q05BQ5 628 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 POU5F1BQ06416 359 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 COASYQ13057 564 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 NBR1Q14596 966 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 SMRP1Q8NCR6 262 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 CNNM3Q8NE01 707 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 FAM193BQ96PV7 902 aaPredicted RBP15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 RAB34Q9BZG1 259 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 TRIM6Q9C030 488 aaPredicted RBP15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 EPHX3Q9H6B9 360 aa15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 DBR1Q9UK59 544 aaKnown RBP15.43■□□□□ 0.06
CHRDL2-205ENST00000528471 HIDE1A8MVS5 230 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 EYA4O95677 639 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 ITGA4P13612 1032 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 NCLP19338 710 aaKnown RBP15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 U2AF2P26368 475 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 CCT6AP40227 531 aaKnown RBP15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 RBM10P98175 930 aaKnown RBP15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 UBXN11Q5T124 520 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 MCTP1Q6DN14 999 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 LLGL2Q6P1M3 1020 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 AGMOQ6ZNB7 445 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 MRPL10Q7Z7H8 261 aaKnown RBP15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 HACE1Q8IYU2 909 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 TMEM87AQ8NBN3 555 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 KHSRPQ92945 711 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 CPB2Q96IY4 423 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 TMX3Q96JJ7 454 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 NFKBIZQ9BYH8 718 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 NRDE2Q9H7Z3 1164 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 UBN1Q9NPG3 1134 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 GPRC5CQ9NQ84 441 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 KANSL3Q9P2N6 904 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 LRWD1Q9UFC0 647 aa15.42■□□□□ 0.06
CHRDL2-205ENST00000528471 MCM2P49736 904 aa15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 PADI6Q6TGC4 694 aa15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 TMEM173Q86WV6 379 aaPredicted RBP15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 ZBTB8OSQ8IWT0 167 aa15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 VPS52Q8N1B4 723 aa15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 VN1R2Q8NFZ6 395 aa15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 IGSF21Q96ID5 467 aa15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 APOL6Q9BWW8 343 aa15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 EIF2AQ9BY44 585 aaKnown RBP15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 CSRNP2Q9H175 543 aa15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 DNAJB4Q9UDY4 337 aa15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 IPPQ9Y573 584 aa15.41■□□□□ 0.06
CHRDL2-205ENST00000528471 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 H3BQV1 296 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 POMCP01189 267 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 GALTP07902 379 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 ALADP13716 330 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 ARF4P18085 180 aaPredicted RBP15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 COL9A1P20849 921 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 MUTP22033 750 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 SLC11A1P49279 550 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 PTGDRQ13258 359 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 TMEM132AQ24JP5 1023 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 TMEM31Q5JXX7 168 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 ZNF280BQ86YH2 543 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 MRPL43Q8N983 215 aaKnown RBP15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 SMG8Q8ND04 991 aaKnown RBP15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 SNX29Q8TEQ0 813 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 C2orf40Q9H1Z8 148 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 USP15Q9Y4E8 981 aaPredicted RBP15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 PCDHB6Q9Y5E3 794 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 STK24Q9Y6E0 443 aa15.4■□□□□ 0.06
CHRDL2-205ENST00000528471 TRIP11Q15643 1979 aa15.39■□□□□ 0.05
CHRDL2-205ENST00000528471 C2orf71A6NGG8 1288 aa15.39■□□□□ 0.05
CHRDL2-205ENST00000528471 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
CHRDL2-205ENST00000528471 PI4K2BG5E9Z4 385 aa15.39■□□□□ 0.05
CHRDL2-205ENST00000528471 LAD1O00515 517 aa15.39■□□□□ 0.05
CHRDL2-205ENST00000528471 B4GALT5O43286 388 aa15.39■□□□□ 0.05
CHRDL2-205ENST00000528471 CXCL14O95715 111 aa15.39■□□□□ 0.05
CHRDL2-205ENST00000528471 GJB2P29033 226 aa15.39■□□□□ 0.05
CHRDL2-205ENST00000528471 MLH1P40692 756 aa15.39■□□□□ 0.05
CHRDL2-205ENST00000528471 TOB1P50616 345 aaPredicted RBP15.39■□□□□ 0.05
CHRDL2-205ENST00000528471 AMHR2Q16671 573 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms