RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 JUNP05412 331 aaKnown RBP7.75□□□□□ -1.17
PCF11-202ENST00000528336 CCND1P24385 295 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 MTNR1BP49286 362 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 SLC5A3P53794 718 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 RIN1Q13671 783 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 ERICH6BQ5W0A0 696 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 TCTN3Q6NUS6 607 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 TAS1R1Q7RTX1 841 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 GPR135Q8IZ08 494 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 MSL3Q8N5Y2 521 aaKnown RBP7.75□□□□□ -1.17
PCF11-202ENST00000528336 CXorf38Q8TB03 319 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 TMEM176AQ96HP8 235 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 OR14A2Q96R54 314 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 RBM15Q96T37 977 aaKnown RBP eCLIP7.75□□□□□ -1.17
PCF11-202ENST00000528336 RCAN3Q9UKA8 241 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 ZCCHC6Q5VYS8 1495 aaKnown RBP7.75□□□□□ -1.17
PCF11-202ENST00000528336 A0A1W2PRX2 142 aa7.74□□□□□ -1.17
PCF11-202ENST00000528336 LTA4HP09960 611 aaKnown RBP7.74□□□□□ -1.17
PCF11-202ENST00000528336 AGXTP21549 392 aa7.74□□□□□ -1.17
PCF11-202ENST00000528336 EXOSC10Q01780 885 aaKnown RBP7.74□□□□□ -1.17
PCF11-202ENST00000528336 ABHD15Q6UXT9 468 aa7.74□□□□□ -1.17
PCF11-202ENST00000528336 PNMA8AQ86V59 439 aaPredicted RBP7.74□□□□□ -1.17
PCF11-202ENST00000528336 GLB1L3Q8NCI6 653 aaPredicted RBP7.74□□□□□ -1.17
PCF11-202ENST00000528336 FATE1Q969F0 183 aa7.74□□□□□ -1.17
PCF11-202ENST00000528336 LOXL4Q96JB6 756 aa7.74□□□□□ -1.17
PCF11-202ENST00000528336 ZFR2Q9UPR6 939 aaKnown RBP7.74□□□□□ -1.17
PCF11-202ENST00000528336 PCDHGA2Q9Y5H1 932 aa7.74□□□□□ -1.17
PCF11-202ENST00000528336 UBE2QL1A1L167 161 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 KLHL33A6NCF5 533 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 TRIM75PA6NK02 468 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 FOXS1O43638 330 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 PCDHGA12O60330 932 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 PDGFRBP09619 1106 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 RBP3P10745 1247 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 ADAM8P78325 824 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 ADRM1Q16186 407 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 BTNL9Q6UXG8 535 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 CEP89Q96ST8 783 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 POLR3GLQ9BT43 218 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 SSBP3Q9BWW4 388 aaPredicted RBP7.73□□□□□ -1.17
PCF11-202ENST00000528336 TLR9Q9NR96 1032 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 ZBTB21Q9ULJ3 1066 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 PCDHGA9Q9Y5G4 932 aaKnown RBP7.73□□□□□ -1.17
PCF11-202ENST00000528336 PCDHGA8Q9Y5G5 932 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 PCDHGA7Q9Y5G6 932 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 PCDHGA6Q9Y5G7 932 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 PCDHGA3Q9Y5H0 932 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 MRFAP1Q9Y605 127 aa7.73□□□□□ -1.17
PCF11-202ENST00000528336 K7ESM1 405 aa7.72□□□□□ -1.17
PCF11-202ENST00000528336 TMEM127O75204 238 aa7.72□□□□□ -1.17
PCF11-202ENST00000528336 CTSSP25774 331 aa7.72□□□□□ -1.17
PCF11-202ENST00000528336 ADSLP30566 484 aaPredicted RBP7.72□□□□□ -1.17
PCF11-202ENST00000528336 GAGE13Q4V321 117 aa7.72□□□□□ -1.17
PCF11-202ENST00000528336 MUM1L1Q5H9M0 696 aa7.72□□□□□ -1.17
PCF11-202ENST00000528336 MBNL2Q5VZF2 373 aaKnown RBP7.72□□□□□ -1.17
PCF11-202ENST00000528336 ANKRD13AQ8IZ07 590 aa7.72□□□□□ -1.17
PCF11-202ENST00000528336 RIN2Q8WYP3 895 aaPredicted RBP7.72□□□□□ -1.17
PCF11-202ENST00000528336 JADE3Q92613 823 aa7.72□□□□□ -1.17
PCF11-202ENST00000528336 IL23AQ9NPF7 189 aa7.72□□□□□ -1.17
PCF11-202ENST00000528336 DMRT3Q9NQL9 472 aa7.72□□□□□ -1.17
PCF11-202ENST00000528336 TYW1Q9NV66 732 aaKnown RBP7.72□□□□□ -1.17
PCF11-202ENST00000528336 BTBD11A6QL63 1104 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 FZD9O00144 591 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 AKR1B10O60218 316 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 GSPT1P15170 499 aaKnown RBP7.71□□□□□ -1.18
PCF11-202ENST00000528336 SYN1P17600 705 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 RPS19P39019 145 aaKnown RBP7.71□□□□□ -1.18
PCF11-202ENST00000528336 CASRP41180 1078 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 NPEPPSP55786 919 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 GRM7Q14831 915 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 ADGRE4PQ86SQ3 457 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 CMTM4Q8IZR5 234 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 FUKQ8N0W3 1084 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 OR5M3Q8NGP4 307 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 SNX33Q8WV41 574 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 UBE2Q2Q8WVN8 375 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 NELFAQ9H3P2 528 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 GREM2Q9H772 168 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 ZNF277Q9NRM2 450 aaPredicted RBP7.71□□□□□ -1.18
PCF11-202ENST00000528336 PLA2G3Q9NZ20 509 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 DNM3Q9UQ16 869 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 MYO15BQ96JP2 1530 aa7.71□□□□□ -1.18
PCF11-202ENST00000528336 PMS2P1A4D2B8 440 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 MSX2P35548 267 aaPredicted RBP7.7□□□□□ -1.18
PCF11-202ENST00000528336 MEF2AQ02078 507 aaPredicted RBP7.7□□□□□ -1.18
PCF11-202ENST00000528336 DUSP2Q05923 314 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 MALLQ13021 153 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 DUSP8Q13202 625 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 ICAM4Q14773 271 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 ANO4Q32M45 955 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 GPR156Q8NFN8 814 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 ARL8AQ96BM9 186 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 PAWRQ96IZ0 340 aaKnown RBP7.7□□□□□ -1.18
PCF11-202ENST00000528336 TCF25Q9BQ70 676 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 ADI1Q9BV57 179 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 ST6GALNAC2Q9UJ37 374 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 SPEF1Q9Y4P9 236 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 NACADO15069 1562 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 RPTORQ8N122 1335 aa7.7□□□□□ -1.18
PCF11-202ENST00000528336 DCAF1Q9Y4B6 1507 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms