RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 IGSF21Q96ID5 467 aa16.89■□□□□ 0.29
EXOSC4-203ENST00000527954 CCDC43Q96MW1 224 aaKnown RBP16.89■□□□□ 0.29
EXOSC4-203ENST00000527954 PHF7Q9BWX1 381 aaPredicted RBP16.89■□□□□ 0.29
EXOSC4-203ENST00000527954 HCN4Q9Y3Q4 1203 aa16.89■□□□□ 0.29
EXOSC4-203ENST00000527954 TSPAN1O60635 241 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 DGAT1O75907 488 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 SLC11A1P49279 550 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 RARRES1P49788 294 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 AFF1P51825 1210 aaKnown RBP16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 PTENP60484 403 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 CAPSQ13938 189 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 TFDP1Q14186 410 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 ZNF174Q15697 407 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 SYCE2Q6PIF2 218 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 VPS52Q8N1B4 723 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 URGCPQ8TCY9 931 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 SUSD6Q92537 303 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 CPB2Q96IY4 423 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 RPGRIP1Q96KN7 1286 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 LLPHQ9BRT6 129 aaKnown RBP16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 S1PR5Q9H228 398 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 RSAD1Q9HA92 442 aa16.88■□□□□ 0.29
EXOSC4-203ENST00000527954 LOC730098B7Z3J9 87 aa16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 INO80B-WBP1J3KQ70 363 aa16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 CLASP2O75122 1294 aaKnown RBP16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 DDHD2O94830 711 aa16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 SPATA31C1P0DKV0 1188 aa16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 ARL2P36404 184 aa16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 BMS1Q14692 1282 aaKnown RBP16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 HERC4Q5GLZ8 1057 aaPredicted RBP16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 DDX53Q86TM3 631 aaKnown RBP16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 SMG8Q8ND04 991 aaKnown RBP16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 CASP10Q92851 521 aa16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 ZSCAN31Q96LW9 406 aaPredicted RBP16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 KIF2CQ99661 725 aa16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 EIF2AQ9BY44 585 aaKnown RBP16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 ZBP1Q9H171 429 aa16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 POLR3FQ9H1D9 316 aaPredicted RBP16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 HCFC2Q9Y5Z7 792 aa16.87■□□□□ 0.29
EXOSC4-203ENST00000527954 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 CARNS1A5YM72 827 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 USO1O60763 962 aaKnown RBP16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 MED24O75448 989 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 POMCP01189 267 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 XRCC6P12956 609 aaKnown RBP eCLIP16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 ITGA4P13612 1032 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 GLRA2P23416 452 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 AXLP30530 894 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 PLA2G5P39877 138 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 MBTD1Q05BQ5 628 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 POU5F1BQ06416 359 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 NCBP1Q09161 790 aaKnown RBP16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 C8orf34Q49A92 452 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 MAEAQ7L5Y9 396 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 CATSPER3Q86XQ3 398 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 CNNM3Q8NE01 707 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 FBXO18Q8NFZ0 1043 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 FAM122AQ96E09 287 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 FAM193BQ96PV7 902 aaPredicted RBP16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 RNF39Q9H2S5 420 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 FOXP1Q9H334 677 aaPredicted RBP16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 IPPQ9Y573 584 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 CNTNAP2Q9UHC6 1331 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 ARID2Q68CP9 1835 aa16.86■□□□□ 0.29
EXOSC4-203ENST00000527954 ALDH2P05091 517 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 CTSAP10619 480 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 HOXB8P17481 243 aaPredicted RBP16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 HMGN5P82970 282 aaKnown RBP16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 GNL2Q13823 731 aaKnown RBP16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 CBX2Q14781 532 aaPredicted RBP16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 PCBP1Q15365 356 aaKnown RBP eCLIP16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 AMHR2Q16671 573 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 NOTUMQ6P988 496 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 FAM184AQ8NB25 1140 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 TMEM87AQ8NBN3 555 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 VN1R3Q9BXE9 311 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 CSRNP2Q9H175 543 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 TUFT1Q9NNX1 390 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 GPRC5CQ9NQ84 441 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 KANSL3Q9P2N6 904 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 CDH22Q9UJ99 828 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 HES2Q9Y543 173 aa16.85■□□□□ 0.29
EXOSC4-203ENST00000527954 NRP1O14786 923 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 B4GALT5O43286 388 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 OR52Z1P0C646 297 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 RBM25P49756 843 aaKnown RBP16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 TPRNQ4KMQ1 711 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 TTC38Q5R3I4 469 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 CDR2LQ86X02 465 aaPredicted RBP16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 EDAQ92838 391 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 CCDC51Q96ER9 411 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 NACC1Q96RE7 527 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 POLR3CQ9BUI4 534 aaPredicted RBP16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 APOL6Q9BWW8 343 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 UBN1Q9NPG3 1134 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 SH2B1Q9NRF2 756 aaPredicted RBP16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 FAN1Q9Y2M0 1017 aa16.84■□□□□ 0.29
EXOSC4-203ENST00000527954 IRAK3Q9Y616 596 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms