RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 SKIP12755 728 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 NPTX2P47972 431 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 ZRSR1Q15695 479 aaKnown RBP12.39□□□□□ -0.43
CTSB-214ENST00000527243 PAN2Q504Q3 1202 aaKnown RBP12.39□□□□□ -0.43
CTSB-214ENST00000527243 FOXD4L5Q5VV16 416 aaPredicted RBP12.39□□□□□ -0.43
CTSB-214ENST00000527243 ATL3Q6DD88 541 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 NOTUMQ6P988 496 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 AGMOQ6ZNB7 445 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 SMG8Q8ND04 991 aaKnown RBP12.39□□□□□ -0.43
CTSB-214ENST00000527243 FOXD4L4Q8WXT5 416 aaPredicted RBP12.39□□□□□ -0.43
CTSB-214ENST00000527243 RSPH1Q8WYR4 309 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 RAD54LQ92698 747 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 KCNN1Q92952 543 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 CALML4Q96GE6 196 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 NTPCRQ9BSD7 190 aaKnown RBP12.39□□□□□ -0.43
CTSB-214ENST00000527243 KIFC3Q9BVG8 833 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 PLVAPQ9BX97 442 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 EIF2AQ9BY44 585 aaKnown RBP12.39□□□□□ -0.43
CTSB-214ENST00000527243 C2orf40Q9H1Z8 148 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 C17orf75Q9HAS0 396 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 TYW1Q9NV66 732 aaKnown RBP12.39□□□□□ -0.43
CTSB-214ENST00000527243 PRMT7Q9NVM4 692 aaPredicted RBP12.39□□□□□ -0.43
CTSB-214ENST00000527243 ARHGAP28Q9P2N2 729 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 PCDHB2Q9Y5E7 798 aa12.39□□□□□ -0.43
CTSB-214ENST00000527243 CNTNAP2Q9UHC6 1331 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 MYO7AQ13402 2215 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 FNDC1Q4ZHG4 1894 aaPredicted RBP12.38□□□□□ -0.43
CTSB-214ENST00000527243 A0A087X0B3 334 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 ACKR2O00590 384 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 INPPL1O15357 1258 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 NCLP19338 710 aaKnown RBP12.38□□□□□ -0.43
CTSB-214ENST00000527243 IBSPP21815 317 aaPredicted RBP12.38□□□□□ -0.43
CTSB-214ENST00000527243 CTNNB1P35222 781 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 ZNF131P52739 623 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 CAMK1Q14012 370 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 MCM6Q14566 821 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 AXDND1Q5T1B0 1012 aaPredicted RBP12.38□□□□□ -0.43
CTSB-214ENST00000527243 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
CTSB-214ENST00000527243 TAS1R3Q7RTX0 852 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 ZBTB8OSQ8IWT0 167 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 HELQQ8TDG4 1101 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 SPIRE2Q8WWL2 714 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 LPPQ93052 612 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 P2RX5Q93086 422 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 CPB2Q96IY4 423 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 IFT74Q96LB3 600 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 DRC1Q96MC2 740 aa12.38□□□□□ -0.43
CTSB-214ENST00000527243 COL4A4P53420 1690 aaPredicted RBP12.38□□□□□ -0.43
CTSB-214ENST00000527243 NPHP3-ACAD11A0A0J9YXS1 232 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 GRM6O15303 877 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 TRAK2O60296 914 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 OFD1O75665 1012 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 SSBP05455 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
CTSB-214ENST00000527243 ITGB1P05556 798 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 PRKCBP05771 671 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 PLS3P13797 630 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 IGFBP4P22692 258 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 EFNA5P52803 228 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 PEX3P56589 373 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 DNM1Q05193 864 aaKnown RBP12.37□□□□□ -0.43
CTSB-214ENST00000527243 GPM6BQ13491 265 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 STK38Q15208 465 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 MAPK6Q16659 721 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 NT5DC1Q5TFE4 455 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 GPBP1Q86WP2 473 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 LRRC43Q8N309 656 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 RNF169Q8NCN4 708 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 CNNM3Q8NE01 707 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 LARP4BQ92615 738 aaKnown RBP12.37□□□□□ -0.43
CTSB-214ENST00000527243 C11orf84Q9BUA3 381 aaPredicted RBP12.37□□□□□ -0.43
CTSB-214ENST00000527243 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 PDZD7Q9H5P4 517 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 TMEM134Q9H6X4 195 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 STK17AQ9UEE5 414 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 RCOR1Q9UKL0 485 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 ODF2LQ9ULJ1 636 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 PLAGL2Q9UPG8 496 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 IPPQ9Y573 584 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 RALGAPA2Q2PPJ7 1873 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 SPTBN5Q9NRC6 3674 aaKnown RBP12.37□□□□□ -0.43
CTSB-214ENST00000527243 BRWD1Q9NSI6 2320 aa12.37□□□□□ -0.43
CTSB-214ENST00000527243 SFI1A8K8P3 1242 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 ABLIM1O14639 778 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
CTSB-214ENST00000527243 B4GALT3O60512 393 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 CUTAO60888 179 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 AFF1P51825 1210 aaKnown RBP12.36□□□□□ -0.43
CTSB-214ENST00000527243 RAD51AP2Q09MP3 1159 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 DMP1Q13316 513 aaPredicted RBP12.36□□□□□ -0.43
CTSB-214ENST00000527243 GIT2Q14161 759 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 E2F4Q16254 413 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 EEF1DP3Q658K8 133 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 SLC27A1Q6PCB7 646 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 CDR2LQ86X02 465 aaPredicted RBP12.36□□□□□ -0.43
CTSB-214ENST00000527243 KLHL23Q8NBE8 558 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 COLGALT1Q8NBJ5 622 aa12.36□□□□□ -0.43
CTSB-214ENST00000527243 TMEM161BQ8NDZ6 487 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms