RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 LPPQ93052 612 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 TMEM143Q96AN5 459 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 IGSF21Q96ID5 467 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 DYDC2Q96IM9 177 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 RPGRIP1Q96KN7 1286 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 NECTIN4Q96NY8 510 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 HSD17B14Q9BPX1 270 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 ADAM7Q9H2U9 754 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 NRDE2Q9H7Z3 1164 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 RGL1Q9NZL6 768 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 HCFC2Q9Y5Z7 792 aa12.38□□□□□ -0.43
AMBRA1-204ENST00000526545 NT5C1B-RDH14C9J2C7 533 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 JAK2O60674 1132 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 CLASP2O75122 1294 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 ALDH2P05091 517 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 GALTP07902 379 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 CTSAP10619 480 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 XRCC6P12956 609 aaKnown RBP eCLIP12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 AXLP30530 894 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 HOXA11P31270 313 aaPredicted RBP12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 ZXDAP98168 799 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 NR5A1Q13285 461 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 CTTNQ14247 550 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 SAFBQ15424 915 aaKnown RBP eCLIP12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 CALCRLQ16602 461 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 TRIM67Q6ZTA4 783 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 RNF149Q8NC42 400 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 SNX21Q969T3 373 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 MTRQ99707 1265 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 EIF2AK1Q9BQI3 630 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 ZBP1Q9H171 429 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 TTC12Q9H892 705 aaPredicted RBP12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 MINDY3Q9H8M7 445 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 ANKEF1Q9NU02 776 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 DZANK1Q9NVP4 752 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 INPP5FQ9Y2H2 1132 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 NR2E1Q9Y466 385 aa12.37□□□□□ -0.43
AMBRA1-204ENST00000526545 TMEM221A6NGB7 291 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 MEIS3P2A8K0S8 358 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 BTBD18B2RXH4 712 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 M0R296 226 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 NEMFO60524 1076 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 DGAT1O75907 488 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 ERLIN2O94905 339 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 CD2BP2O95400 341 aaKnown RBP12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 NCLP19338 710 aaKnown RBP12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 MTHFRP42898 656 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 PTENP60484 403 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 TFDP1Q14186 410 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 LONRF3Q496Y0 759 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 AGMOQ6ZNB7 445 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 PPFIBP1Q86W92 1011 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 CCDC51Q96ER9 411 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 C8orf76Q96K31 380 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 RIPOR3Q96MK2 946 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 FAM193BQ96PV7 902 aaPredicted RBP12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 TMEM175Q9BSA9 504 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 RSAD1Q9HA92 442 aa12.36□□□□□ -0.43
AMBRA1-204ENST00000526545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 FAM205CA6NFA0 338 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 ZBTB39O15060 712 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 CA8P35219 290 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 TXKP42681 527 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 SLC11A1P49279 550 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 SIGLEC14Q08ET2 396 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 ST3GAL1Q11201 340 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 PTPN21Q16825 1174 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 UBXN11Q5T124 520 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 NOTUMQ6P988 496 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 TMEM173Q86WV6 379 aaPredicted RBP12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 ZNF280BQ86YH2 543 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 DIS3L2Q8IYB7 885 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 PBXIP1Q96AQ6 731 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 CCDC43Q96MW1 224 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 MTMR9Q96QG7 549 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 PRRX2Q99811 253 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 EMILIN2Q9BXX0 1053 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 NFKBIZQ9BYH8 718 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 GBP3Q9H0R5 595 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 DNAJB4Q9UDY4 337 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 SMC3Q9UQE7 1217 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 FAN1Q9Y2M0 1017 aa12.35□□□□□ -0.43
AMBRA1-204ENST00000526545 WDFY4Q6ZS81 3184 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 INPPL1O15357 1258 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 DTNBO60941 627 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 ITGA4P13612 1032 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 ARL2P36404 184 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 CUL4AQ13619 759 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 ATAT1Q5SQI0 421 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 HACE1Q8IYU2 909 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 FBXO18Q8NFZ0 1043 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 SLC22A17Q8WUG5 538 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 APOL5Q9BWW9 433 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 CSRNP2Q9H175 543 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 XPNPEP1Q9NQW7 623 aa12.34□□□□□ -0.43
AMBRA1-204ENST00000526545 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms