RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 KCNT2Q6UVM3 1135 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 PPP4R3CPQ6ZMV5 832 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 AGMOQ6ZNB7 445 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 ADAMTS19Q8TE59 1207 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 RSPH1Q8WYR4 309 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 KIFAP3Q92845 792 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 AK8Q96MA6 479 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 ZNF558Q96NG5 402 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 PLIN2Q99541 437 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 RUSC1Q9BVN2 902 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 CSRNP2Q9H175 543 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 C2orf40Q9H1Z8 148 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 INPP5FQ9Y2H2 1132 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 CLIC4Q9Y696 253 aa20.47■□□□□ 0.87
TSPAN4-215ENST00000525334 STX6O43752 255 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 OFD1O75665 1012 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 NCLP19338 710 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 IRS1P35568 1242 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 UBE3AQ05086 875 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 GRIN1Q05586 938 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 PPP2R5AQ15172 486 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 TMEM119Q4V9L6 283 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 NOMO2Q5JPE7 1267 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 CABP7Q86V35 215 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 SMG8Q8ND04 991 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 DEPTORQ8TB45 409 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 CDK5RAP3Q96JB5 506 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 KIFC3Q9BVG8 833 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 NT5C3AQ9H0P0 336 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 FZD8Q9H461 694 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 UBE2ZQ9H832 354 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 RSAD1Q9HA92 442 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 PRMT7Q9NVM4 692 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 IPPQ9Y573 584 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 NCOR1O75376 2440 aa20.46■□□□□ 0.87
TSPAN4-215ENST00000525334 PTPAQ15257 358 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 FAM187BQ17R55 369 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 RINT1Q6NUQ1 792 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 CDR2LQ86X02 465 aaPredicted RBP20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 DAW1Q8N136 415 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 KCTD17Q8N5Z5 321 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 CNNM3Q8NE01 707 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 IFT74Q96LB3 600 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 PRIMPOLQ96LW4 560 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 CCDC113Q9H0I3 377 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 TBC1D13Q9NVG8 400 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 CNTNAP2Q9UHC6 1331 aa20.45■□□□□ 0.86
TSPAN4-215ENST00000525334 A0A1B0GUA9 196 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 HIP1RO75146 1068 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 SSBP05455 408 aaKnown RBP eCLIP20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 ITGA4P13612 1032 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 PPM1AP35813 382 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 LONP1P36776 959 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 UBA7P41226 1012 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 AFF1P51825 1210 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 PLCB3Q01970 1234 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 HYAL1Q12794 435 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 C1orf186Q6ZWK4 172 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 SLC39A11Q8N1S5 342 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 UHRF1Q96T88 793 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 TLR9Q9NR96 1032 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 HES2Q9Y543 173 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 PCDHGC5Q9Y5F6 944 aa20.44■□□□□ 0.86
TSPAN4-215ENST00000525334 MUC3AQ02505 3323 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 TTLL13PA6NNM8 815 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 TNFRSF10AO00220 468 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 SLC26A4O43511 780 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 ZC3H11AO75152 810 aaKnown RBP eCLIP20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 NPTXRO95502 500 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 PRKCBP05771 671 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 LIG1P18858 919 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 BCAR1P56945 870 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 MAPK7Q13164 816 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 COL19A1Q14993 1142 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 MAPK6Q16659 721 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 SLC27A1Q6PCB7 646 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 ADGRD2Q7Z7M1 963 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 SYT2Q8N9I0 419 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 URGCPQ8TCY9 931 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 MRPS27Q92552 414 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 PABPC5Q96DU9 382 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 TRIM6Q9C030 488 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 RNF39Q9H2S5 420 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 NXF3Q9H4D5 531 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 ZSCAN16Q9H4T2 348 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 NRDE2Q9H7Z3 1164 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 SPG21Q9NZD8 308 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 LZTS1Q9Y250 596 aa20.43■□□□□ 0.86
TSPAN4-215ENST00000525334 NT5C1B-RDH14C9J2C7 533 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 B4GALT3O60512 393 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 EDN1P05305 212 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 HSP90AA1P07900 732 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 PLA2G4BP0C869 781 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 KCNA5P22460 613 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 GUCY2CP25092 1073 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 MARCKSP29966 332 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 ALDH7A1P49419 539 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 SLC12A3P55017 1021 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 ERVFC1P60507 584 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 CEBPZQ03701 1054 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms