RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 SLC2A13Q96QE2 648 aa5.89□□□□□ -1.47
CD44-215ENST00000525241 SLC13A1Q9BZW2 595 aa5.89□□□□□ -1.47
CD44-215ENST00000525241 C12orf65Q9H3J6 166 aaKnown RBP5.89□□□□□ -1.47
CD44-215ENST00000525241 SCOCQ9UIL1 159 aa5.89□□□□□ -1.47
CD44-215ENST00000525241 SPEF1Q9Y4P9 236 aa5.89□□□□□ -1.47
CD44-215ENST00000525241 MTSS1O43312 755 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 ALDH1A2O94788 518 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 JUNP05412 331 aaKnown RBP5.88□□□□□ -1.47
CD44-215ENST00000525241 LTA4HP09960 611 aaKnown RBP5.88□□□□□ -1.47
CD44-215ENST00000525241 CTSSP25774 331 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 MEF2AQ02078 507 aaPredicted RBP5.88□□□□□ -1.47
CD44-215ENST00000525241 RIN1Q13671 783 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 CLUL1Q15846 466 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 PTPN21Q16825 1174 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 MBNL2Q5VZF2 373 aaKnown RBP5.88□□□□□ -1.47
CD44-215ENST00000525241 TCTN3Q6NUS6 607 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 GLB1LQ6UWU2 654 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 BTNL9Q6UXG8 535 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 ABHD15Q6UXT9 468 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 ADGRE4PQ86SQ3 457 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 GLB1L3Q8NCI6 653 aaPredicted RBP5.88□□□□□ -1.47
CD44-215ENST00000525241 SHCBP1Q8NEM2 672 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 JADE3Q92613 823 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 FATE1Q969F0 183 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 BDH2Q9BUT1 245 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 PLA2G12BQ9BX93 195 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 ACE2Q9BYF1 805 aaPredicted RBP5.88□□□□□ -1.47
CD44-215ENST00000525241 MSL2Q9HCI7 577 aa5.88□□□□□ -1.47
CD44-215ENST00000525241 KLHL33A6NCF5 533 aa5.87□□□□□ -1.47
CD44-215ENST00000525241 C19orf54Q5BKX5 351 aa5.87□□□□□ -1.47
CD44-215ENST00000525241 CIR1Q86X95 450 aaPredicted RBP5.87□□□□□ -1.47
CD44-215ENST00000525241 SNX33Q8WV41 574 aa5.87□□□□□ -1.47
CD44-215ENST00000525241 SSH1Q8WYL5 1049 aa5.87□□□□□ -1.47
CD44-215ENST00000525241 RELTQ969Z4 430 aa5.87□□□□□ -1.47
CD44-215ENST00000525241 PAWRQ96IZ0 340 aaKnown RBP5.87□□□□□ -1.47
CD44-215ENST00000525241 GREM2Q9H772 168 aa5.87□□□□□ -1.47
CD44-215ENST00000525241 FOXS1O43638 330 aa5.86□□□□□ -1.47
CD44-215ENST00000525241 FOXD2O60548 495 aaPredicted RBP5.86□□□□□ -1.47
CD44-215ENST00000525241 PPP3CAQ08209 521 aa5.86□□□□□ -1.47
CD44-215ENST00000525241 MALLQ13021 153 aa5.86□□□□□ -1.47
CD44-215ENST00000525241 ODF1Q14990 250 aa5.86□□□□□ -1.47
CD44-215ENST00000525241 KRT40Q6A162 431 aa5.86□□□□□ -1.47
CD44-215ENST00000525241 GIMAP8Q8ND71 665 aaPredicted RBP5.86□□□□□ -1.47
CD44-215ENST00000525241 DNERQ8NFT8 737 aa5.86□□□□□ -1.47
CD44-215ENST00000525241 RIN2Q8WYP3 895 aaPredicted RBP5.86□□□□□ -1.47
CD44-215ENST00000525241 KRTAP9-9Q9BYP9 154 aa5.86□□□□□ -1.47
CD44-215ENST00000525241 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
CD44-215ENST00000525241 NELFAQ9H3P2 528 aa5.86□□□□□ -1.47
CD44-215ENST00000525241 RPTORQ8N122 1335 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 UBE2QL1A1L167 161 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 PATE3B3GLJ2 98 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 XPOTO43592 962 aaKnown RBP5.85□□□□□ -1.47
CD44-215ENST00000525241 PRAMEF4O60810 478 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 ALDH1L1O75891 902 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 RAD17O75943 681 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 C5AR1P21730 350 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 RPS19P39019 145 aaKnown RBP5.85□□□□□ -1.47
CD44-215ENST00000525241 MCAMP43121 646 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 NEK2P51955 445 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 WNT3AP56704 352 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 ACAP2Q15057 778 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 PLEKHG6Q3KR16 790 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 MUM1L1Q5H9M0 696 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 LILRA6Q6PI73 481 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 CMTM4Q8IZR5 234 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 FUKQ8N0W3 1084 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 GPR156Q8NFN8 814 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 CHMP4CQ96CF2 233 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 TEKT5Q96M29 485 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 CEP89Q96ST8 783 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 ENKD1Q9H0I2 346 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 IL23AQ9NPF7 189 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 DMRT3Q9NQL9 472 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 TLR9Q9NR96 1032 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 TUBD1Q9UJT1 453 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 ZFR2Q9UPR6 939 aaKnown RBP5.85□□□□□ -1.47
CD44-215ENST00000525241 MRFAP1Q9Y605 127 aa5.85□□□□□ -1.47
CD44-215ENST00000525241 A0A1W2PRX2 142 aa5.84□□□□□ -1.47
CD44-215ENST00000525241 PLP2Q04941 152 aa5.84□□□□□ -1.47
CD44-215ENST00000525241 ICAM4Q14773 271 aa5.84□□□□□ -1.47
CD44-215ENST00000525241 TTF1Q15361 905 aaPredicted RBP5.84□□□□□ -1.47
CD44-215ENST00000525241 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
CD44-215ENST00000525241 PNMA8AQ86V59 439 aaPredicted RBP5.84□□□□□ -1.47
CD44-215ENST00000525241 LILRA3Q8N6C8 439 aaPredicted RBP5.84□□□□□ -1.47
CD44-215ENST00000525241 PPM1NQ8N819 430 aa5.84□□□□□ -1.47
CD44-215ENST00000525241 OR14A2Q96R54 314 aa5.84□□□□□ -1.47
CD44-215ENST00000525241 RBM12Q9NTZ6 932 aaKnown RBP5.84□□□□□ -1.47
CD44-215ENST00000525241 PLA2G3Q9NZ20 509 aa5.84□□□□□ -1.47
CD44-215ENST00000525241 CNOT11Q9UKZ1 510 aaKnown RBP5.84□□□□□ -1.47
CD44-215ENST00000525241 SLC30A1Q9Y6M5 507 aa5.84□□□□□ -1.47
CD44-215ENST00000525241 NRP1O14786 923 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 AKR1B10O60218 316 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 NDUFS2O75306 463 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 GSPT1P15170 499 aaKnown RBP5.83□□□□□ -1.48
CD44-215ENST00000525241 SYN1P17600 705 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 CCND1P24385 295 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 CASRP41180 1078 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 MCL1Q07820 350 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 FOXL1Q12952 345 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 GRM7Q14831 915 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms