RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 SPG21Q9NZD8 308 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 NOL7Q9UMY1 257 aaKnown RBP13.96□□□□□ -0.17
SMCO4-202ENST00000525141 PIN4Q9Y237 131 aaKnown RBP13.96□□□□□ -0.17
SMCO4-202ENST00000525141 PCDHB2Q9Y5E7 798 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 DDHD2O94830 711 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 HSP90AA1P07900 732 aaKnown RBP13.95□□□□□ -0.18
SMCO4-202ENST00000525141 GALTP07902 379 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 SYT1P21579 422 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 GLRA2P23416 452 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 ZP2Q05996 745 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 POU5F1BQ06416 359 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 COASYQ13057 564 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 CSPP1Q1MSJ5 1256 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 RILPL1Q5EBL4 403 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 ABI1Q8IZP0 508 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 LRRC43Q8N309 656 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 TCP11Q8WWU5 503 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 POLR3CQ9BUI4 534 aaPredicted RBP13.95□□□□□ -0.18
SMCO4-202ENST00000525141 S1PR5Q9H228 398 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 MIOSQ9NXC5 875 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 DNAJB4Q9UDY4 337 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 CD207Q9UJ71 328 aa13.95□□□□□ -0.18
SMCO4-202ENST00000525141 BARX2Q9UMQ3 279 aaPredicted RBP13.95□□□□□ -0.18
SMCO4-202ENST00000525141 GAS2O43903 313 aaKnown RBP13.94□□□□□ -0.18
SMCO4-202ENST00000525141 DGAT1O75907 488 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 COL9A1P20849 921 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 CAPSQ13938 189 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 IL17AQ16552 155 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 NOMO2Q5JPE7 1267 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 TTC38Q5R3I4 469 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 PDE12Q6L8Q7 609 aaKnown RBP13.94□□□□□ -0.18
SMCO4-202ENST00000525141 BRAPQ7Z569 592 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 ADHFE1Q8IWW8 467 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 MRPL43Q8N983 215 aaKnown RBP13.94□□□□□ -0.18
SMCO4-202ENST00000525141 LRFN3Q9BTN0 628 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 VN1R3Q9BXE9 311 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 EIF2AQ9BY44 585 aaKnown RBP13.94□□□□□ -0.18
SMCO4-202ENST00000525141 POLD4Q9HCU8 107 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 TUFT1Q9NNX1 390 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 GPRC5CQ9NQ84 441 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 TBC1D13Q9NVG8 400 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 PUF60Q9UHX1 559 aaKnown RBP13.94□□□□□ -0.18
SMCO4-202ENST00000525141 ARID2Q68CP9 1835 aa13.94□□□□□ -0.18
SMCO4-202ENST00000525141 C2orf71A6NGG8 1288 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 TSPAN1O60635 241 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 SKIP12755 728 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 NDUFV1P49821 464 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 KRT17Q04695 432 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 MBTD1Q05BQ5 628 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 SMAD4Q13485 552 aaKnown RBP13.93□□□□□ -0.18
SMCO4-202ENST00000525141 MXD4Q14582 209 aaPredicted RBP13.93□□□□□ -0.18
SMCO4-202ENST00000525141 PLPP4Q5VZY2 271 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 SYCE2Q6PIF2 218 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 SMRP1Q8NCR6 262 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 CPB2Q96IY4 423 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 TCF25Q9BQ70 676 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 PRKAG3Q9UGI9 489 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 DBR1Q9UK59 544 aaKnown RBP13.93□□□□□ -0.18
SMCO4-202ENST00000525141 PCDHB6Q9Y5E3 794 aa13.93□□□□□ -0.18
SMCO4-202ENST00000525141 TTLL13PA6NNM8 815 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 LAD1O00515 517 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 B4GALT5O43286 388 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 STX6O43752 255 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 GPR37L1O60883 481 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 CXCL14O95715 111 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 OR52Z1P0C646 297 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 ARF4P18085 180 aaPredicted RBP13.92□□□□□ -0.18
SMCO4-202ENST00000525141 NCLP19338 710 aaKnown RBP13.92□□□□□ -0.18
SMCO4-202ENST00000525141 RPA1P27694 616 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 SLC11A1P49279 550 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 ALDH7A1P49419 539 aaKnown RBP13.92□□□□□ -0.18
SMCO4-202ENST00000525141 BECN1Q14457 450 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 MAEAQ7L5Y9 396 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 TMC7Q7Z402 723 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 FEZF2Q8TBJ5 459 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 BSNDQ8WZ55 320 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 PGBD4Q96DM1 585 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 IGSF21Q96ID5 467 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 NACC1Q96RE7 527 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 C1QTNF1Q9BXJ1 281 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 NGRNQ9NPE2 291 aaKnown RBP13.92□□□□□ -0.18
SMCO4-202ENST00000525141 INPP5FQ9Y2H2 1132 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 HES2Q9Y543 173 aa13.92□□□□□ -0.18
SMCO4-202ENST00000525141 VPS37CA5D8V6 355 aaPredicted RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 FAM86C2PA6NEL3 165 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 LILRB3O75022 631 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 CLASP2O75122 1294 aaKnown RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 EFEMP2O95967 443 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 SSTR3P32745 418 aaPredicted RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 PPM1AP35813 382 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 RAB27AP51159 221 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 PTGDRQ13258 359 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 PDIA5Q14554 519 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 POTEGQ6S5H5 508 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 GLB1LQ6UWU2 654 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 DDX53Q86TM3 631 aaKnown RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 CDR2LQ86X02 465 aaPredicted RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 GSTCDQ8NEC7 633 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 AUTS2Q8WXX7 1259 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms