RNA–Protein interactions for RNA: ENST00000525076.5

CTSB-208, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-208ENST00000525076 VAV3Q9UKW4 847 aa16.99■□□□□ 0.31
CTSB-208ENST00000525076 KCNJ14Q9UNX9 436 aa16.99■□□□□ 0.31
CTSB-208ENST00000525076 CNTNAP2Q9UHC6 1331 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 ST18O60284 1047 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 CCNT1O60563 726 aaKnown RBP16.98■□□□□ 0.31
CTSB-208ENST00000525076 ALDH2P05091 517 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 KLRC2P26717 231 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 PTPN14Q15678 1187 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 AGMOQ6ZNB7 445 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 OTUD6AQ7L8S5 288 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 ZNF280BQ86YH2 543 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 TCP11Q8WWU5 503 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 PRPF31Q8WWY3 499 aaKnown RBP16.98■□□□□ 0.31
CTSB-208ENST00000525076 TMEM143Q96AN5 459 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 ACSF2Q96CM8 615 aaPredicted RBP16.98■□□□□ 0.31
CTSB-208ENST00000525076 NAP1L4Q99733 375 aaKnown RBP16.98■□□□□ 0.31
CTSB-208ENST00000525076 PHF20Q9BVI0 1012 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 DHX33Q9H6R0 707 aaKnown RBP16.98■□□□□ 0.31
CTSB-208ENST00000525076 SFXN1Q9H9B4 322 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 KCNMB3Q9NPA1 279 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 LIMD1Q9UGP4 676 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 FAN1Q9Y2M0 1017 aa16.98■□□□□ 0.31
CTSB-208ENST00000525076 TBX3O15119 743 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 ASAP2O43150 1006 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 GAS2O43903 313 aaKnown RBP16.97■□□□□ 0.31
CTSB-208ENST00000525076 SSBP05455 408 aaKnown RBP eCLIP16.97■□□□□ 0.31
CTSB-208ENST00000525076 ASGR2P07307 311 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
CTSB-208ENST00000525076 LAMTOR4Q0VGL1 99 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 KANK3Q6NY19 840 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 TMC5Q6UXY8 1006 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 MRPL10Q7Z7H8 261 aaKnown RBP16.97■□□□□ 0.31
CTSB-208ENST00000525076 C4orf19Q8IY42 314 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 KLHL5Q96PQ7 755 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 LXNQ9BS40 222 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 TMEM175Q9BSA9 504 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 UBN1Q9NPG3 1134 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 MRPL17Q9NRX2 175 aaKnown RBP16.97■□□□□ 0.31
CTSB-208ENST00000525076 USP34Q70CQ2 3546 aa16.97■□□□□ 0.31
CTSB-208ENST00000525076 H0Y858 1186 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 GALR2O43603 387 aaPredicted RBP16.96■□□□□ 0.31
CTSB-208ENST00000525076 GFRA3O60609 400 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 DDHD2O94830 711 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 ERLIN2O94905 339 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 CLCN4P51793 760 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 PCBP1Q15365 356 aaKnown RBP eCLIP16.96■□□□□ 0.31
CTSB-208ENST00000525076 EPHA7Q15375 998 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 PIK3AP1Q6ZUJ8 805 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 CCDC149Q6ZUS6 474 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 OTOP3Q7RTS5 596 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 GPR149Q86SP6 731 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 ZNF579Q8NAF0 562 aaKnown RBP16.96■□□□□ 0.31
CTSB-208ENST00000525076 RNF149Q8NC42 400 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 VN1R3Q9BXE9 311 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 MFSD1Q9H3U5 465 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 MINDY3Q9H8M7 445 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 BMP2KQ9NSY1 1161 aaPredicted RBP16.96■□□□□ 0.31
CTSB-208ENST00000525076 SSX2IPQ9Y2D8 614 aa16.96■□□□□ 0.31
CTSB-208ENST00000525076 PTPRZ1P23471 2315 aaPredicted RBP16.96■□□□□ 0.3
CTSB-208ENST00000525076 B4GALT3O60512 393 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 BAG4O95429 457 aaKnown RBP16.95■□□□□ 0.3
CTSB-208ENST00000525076 POMCP01189 267 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 CNPP09543 421 aaKnown RBP16.95■□□□□ 0.3
CTSB-208ENST00000525076 ITGA4P13612 1032 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 NCLP19338 710 aaKnown RBP16.95■□□□□ 0.3
CTSB-208ENST00000525076 HOXA11P31270 313 aaPredicted RBP16.95■□□□□ 0.3
CTSB-208ENST00000525076 NCBP1Q09161 790 aaKnown RBP16.95■□□□□ 0.3
CTSB-208ENST00000525076 SCRN1Q12765 414 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 EMC2Q15006 297 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 XKR9Q5GH70 373 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 NCAPH2Q6IBW4 605 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 FERMT3Q86UX7 667 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 HAS1Q92839 578 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 MTRQ99707 1265 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 SMOC2Q9H3U7 446 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 ZSWIM4Q9H7M6 989 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 WRAP73Q9P2S5 460 aaPredicted RBP16.95■□□□□ 0.3
CTSB-208ENST00000525076 RIF1Q5UIP0 2472 aaKnown RBP16.95■□□□□ 0.3
CTSB-208ENST00000525076 DENND4AQ7Z401 1863 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 STK36Q9NRP7 1315 aa16.95■□□□□ 0.3
CTSB-208ENST00000525076 NRP1O14786 923 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 SOD2P04179 222 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 URODP06132 367 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 AXLP30530 894 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 AFF1P51825 1210 aaKnown RBP16.94■□□□□ 0.3
CTSB-208ENST00000525076 UBXN11Q5T124 520 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 ASTLQ6HA08 431 aaPredicted RBP16.94■□□□□ 0.3
CTSB-208ENST00000525076 ELMSAN1Q6PJG2 1045 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 C15orf39Q6ZRI6 1047 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 SLFN12Q8IYM2 578 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 DYDC2Q96IM9 177 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 RGL1Q9NZL6 768 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 DPP7Q9UHL4 492 aa16.94■□□□□ 0.3
CTSB-208ENST00000525076 C2CD2LO14523 706 aa16.93■□□□□ 0.3
CTSB-208ENST00000525076 NR1I2O75469 434 aa16.93■□□□□ 0.3
CTSB-208ENST00000525076 OR1G1P47890 313 aa16.93■□□□□ 0.3
CTSB-208ENST00000525076 AK2P54819 239 aa16.93■□□□□ 0.3
CTSB-208ENST00000525076 CYP4A11Q02928 519 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms