RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ELL2O00472 640 aaPredicted RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 PPP1R12AO14974 1030 aaPredicted RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 TGM5O43548 720 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 OPHN1O60890 802 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 ASLP04424 464 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 CYP17A1P05093 508 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 JUNP05412 331 aaKnown RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 GAAP10253 952 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 ATP2A2P16615 1042 aaKnown RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 SLC9A1P19634 815 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 FBLP22087 321 aaKnown RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 IGFALSP35858 605 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 KIR2DL3P43628 341 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 CRHR2Q13324 411 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 SPIDRQ14159 915 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 FKBP15Q5T1M5 1219 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 MBNL2Q5VZF2 373 aaKnown RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 LYSMD2Q8IV50 215 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 VRK3Q8IV63 474 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 PIK3C3Q8NEB9 887 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 GPR150Q8NGU9 434 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 WDR48Q8TAF3 677 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 GCDHQ92947 438 aaPredicted RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 E2F7Q96AV8 911 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 TCF25Q9BQ70 676 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 FDXACB1Q9BRP7 624 aaPredicted RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 GPR87Q9BY21 358 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 CPEB1Q9BZB8 566 aaKnown RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 OSBPL6Q9BZF3 934 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 MTFR1LQ9H019 292 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 MTG2Q9H4K7 406 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 PRDM13Q9H4Q3 707 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 ALG13Q9NP73 1137 aaKnown RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.62□□□□□ -1.99
CD44-212ENST00000524922 H2AFY2Q9P0M6 372 aaPredicted RBP2.62□□□□□ -1.99
CD44-212ENST00000524922 TMPRSS11EQ9UL52 423 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 SPO11Q9Y5K1 396 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 TNFRSF18Q9Y5U5 241 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 EFCAB5A4FU69 1503 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 AGLP35573 1532 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 FAM135AQ9P2D6 1515 aa2.62□□□□□ -1.99
CD44-212ENST00000524922 CNTLNQ9NXG0 1405 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 FAM20BO75063 409 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 RFPL3O75679 317 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 KRT37O76014 449 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 SEC24DO94855 1032 aaPredicted RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 PRPF6O94906 941 aaKnown RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 POU3F2P20265 443 aaPredicted RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 BCAR1P56945 870 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 SMAD3P84022 425 aaKnown RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 DSG1Q02413 1049 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 FAM214AQ32MH5 1076 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 ZBTB41Q5SVQ8 909 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 KIAA1841Q6NSI8 718 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 DDX53Q86TM3 631 aaKnown RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 PRIMA1Q86XR5 153 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 SLC41A1Q8IVJ1 513 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 CMTM4Q8IZR5 234 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 LILRA3Q8N6C8 439 aaPredicted RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 OR52N2Q8NGI0 321 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 SLC25A43Q8WUT9 341 aaPredicted RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 TTPALQ9BTX7 342 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 MYL10Q9BUA6 226 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 LSM14BQ9BX40 385 aaKnown RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 POFUT1Q9H488 388 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 ZNF768Q9H5H4 540 aaKnown RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 NRDE2Q9H7Z3 1164 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 OXSMQ9NWU1 459 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 FZD1Q9UP38 647 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 CDK11AQ9UQ88 783 aaPredicted RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 SETD1BQ9UPS6 1966 aaKnown RBP2.61□□□□□ -1.99
CD44-212ENST00000524922 ABCA8O94911 1581 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 CFAP74Q9C0B2 1584 aa2.61□□□□□ -1.99
CD44-212ENST00000524922 KIAA0556O60303 1618 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 ZCCHC11Q5TAX3 1644 aaKnown RBP2.6□□□□□ -1.99
CD44-212ENST00000524922 NCOA1Q15788 1441 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 UHRF1BP1Q6BDS2 1440 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 PREX1Q8TCU6 1659 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 CPS1P31327 1500 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 B4E1Z4 1266 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 HOXA3O43365 443 aaPredicted RBP2.6□□□□□ -1.99
CD44-212ENST00000524922 RAMP2O60895 175 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 RPS6KA4O75676 772 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 F2P00734 622 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 PFKMP08237 780 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 JMJD7P0C870 316 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 FAM189BP81408 668 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 ADCY2Q08462 1091 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 CNGB1Q14028 1251 aaPredicted RBP2.6□□□□□ -1.99
CD44-212ENST00000524922 DCAF17Q5H9S7 520 aaPredicted RBP2.6□□□□□ -1.99
CD44-212ENST00000524922 METTL24Q5JXM2 366 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 PIK3R6Q5UE93 754 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 PRAMEF9Q5VWM5 478 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 CDCA2Q69YH5 1023 aaPredicted RBP2.6□□□□□ -1.99
CD44-212ENST00000524922 LAIR1Q6GTX8 287 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 MFSD5Q6N075 450 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 BTNL9Q6UXG8 535 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 GPRIN1Q7Z2K8 1008 aa2.6□□□□□ -1.99
CD44-212ENST00000524922 APBB1IPQ7Z5R6 666 aaPredicted RBP2.6□□□□□ -1.99
CD44-212ENST00000524922 NME9Q86XW9 330 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms