RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 CCNHP51946 323 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-202ENST00000524773 ARHGAP4P98171 946 aa14.2□□□□□ -0.14
CAPN1-202ENST00000524773 C2CD6Q53TS8 623 aa14.2□□□□□ -0.14
CAPN1-202ENST00000524773 FAM47EQ6ZV65 393 aa14.2□□□□□ -0.14
CAPN1-202ENST00000524773 ATP6V0A4Q9HBG4 840 aa14.2□□□□□ -0.14
CAPN1-202ENST00000524773 TMEM120BA0PK00 339 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 SRRM3A6NNA2 597 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 CCDC169A6NNP5 214 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 RIPK2O43353 540 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 TTLL1O95922 423 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 SEPT2Q15019 361 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 HP1BP3Q5SSJ5 553 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 EPM2AIP1Q7L775 607 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 ZC3H3Q8IXZ2 948 aaKnown RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 MRRFQ96E11 262 aaKnown RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 DAGLAQ9Y4D2 1042 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 PFASO15067 1338 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 FERP16591 822 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 SLC8A1P32418 973 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 FMO5P49326 533 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 HYIQ5T013 277 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 ARHGAP27Q6ZUM4 889 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 CYP4X1Q8N118 509 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 EIF1ADQ8N9N8 165 aaKnown RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 TYW1Q9NV66 732 aaKnown RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 PKD2L1Q9P0L9 805 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 C6orf229H3BNL8 230 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 MEIS2O14770 477 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 SNX3O60493 162 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 NQO1P15559 274 aaKnown RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 EIF3BP55884 814 aaKnown RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 NFIAQ12857 509 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 ORC2Q13416 577 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 ARHGEF19Q8IW93 802 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 FITM2Q8N6M3 262 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 SYT2Q8N9I0 419 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 KLHL29Q96CT2 875 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 INTS2Q9H0H0 1204 aaKnown RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 UBE2TQ9NPD8 197 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-202ENST00000524773 KCNQ5Q9NR82 932 aa14.19□□□□□ -0.14
CAPN1-202ENST00000524773 PDXKO00764 312 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 NUDT17P0C025 328 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 TMEM253P0C7T8 217 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 MAP2K1Q02750 393 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-202ENST00000524773 TRIM68Q6AZZ1 485 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 C3orf20Q8ND61 904 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 ARHGEF1Q92888 912 aaKnown RBP14.18□□□□□ -0.14
CAPN1-202ENST00000524773 ARHGEF2Q92974 986 aaKnown RBP14.18□□□□□ -0.14
CAPN1-202ENST00000524773 SPDL1Q96EA4 605 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 SBF2Q86WG5 1849 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 ZMYM2Q9UBW7 1377 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 MYO3BQ8WXR4 1341 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 CLSTN1O94985 981 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 GHRP10912 638 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 KYNUQ16719 465 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 RBM26Q5T8P6 1007 aaKnown RBP14.18□□□□□ -0.14
CAPN1-202ENST00000524773 LLGL2Q6P1M3 1020 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 KIAA0825Q8IV33 1275 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 CCDC50Q8IVM0 306 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 ETNPPLQ8TBG4 499 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 MICAL1Q8TDZ2 1067 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 PGM2Q96G03 612 aa14.18□□□□□ -0.14
CAPN1-202ENST00000524773 MSH4O15457 936 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 CLDN3O15551 220 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 ASAP2O43150 1006 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 FAM13AO94988 1023 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 SNHG28P0DPA3 235 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 EPC2Q52LR7 807 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 CAPN12Q6ZSI9 719 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 RPUSD2Q8IZ73 545 aaKnown RBP14.17□□□□□ -0.14
CAPN1-202ENST00000524773 TMEM237Q96Q45 408 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 CARD9Q9H257 536 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 CDC42EP4Q9H3Q1 356 aaKnown RBP14.17□□□□□ -0.14
CAPN1-202ENST00000524773 C15orf41Q9Y2V0 281 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 RABGAP1Q9Y3P9 1069 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 NAV1Q8NEY1 1877 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 A0A1B0GUA9 196 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 EME2A4GXA9 379 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-202ENST00000524773 ENO4A6NNW6 628 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 CETPP11597 493 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 LMNB1P20700 586 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 GCLMP48507 274 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 RINT1Q6NUQ1 792 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 ARMC9Q7Z3E5 817 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 LENG9Q96B70 501 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 RSRC1Q96IZ7 334 aaKnown RBP14.17□□□□□ -0.14
CAPN1-202ENST00000524773 PCDHB18PQ96TA0 734 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 EIF2AK1Q9BQI3 630 aaKnown RBP14.17□□□□□ -0.14
CAPN1-202ENST00000524773 STK33Q9BYT3 514 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 TRIM7Q9C029 511 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 NYXQ9GZU5 481 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 POLLQ9UGP5 575 aa14.17□□□□□ -0.14
CAPN1-202ENST00000524773 A0A0A6YYK5 440 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 KIF1CO43896 1103 aaKnown RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 PHF2O75151 1096 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 RTN2O75298 545 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 SGPL1O95470 568 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms