RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SLIT1O75093 1534 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 PLD2O14939 933 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 PRLP01236 227 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 C1SP09871 688 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 MECP2P51608 486 aaKnown RBP4.22□□□□□ -1.73
CSDE1-208ENST00000524652 TGFB2P61812 414 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 RIN1Q13671 783 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 IDI1Q13907 227 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 CRB2Q5IJ48 1285 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 IGFL4Q6B9Z1 124 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 SIN3AQ96ST3 1273 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 GIT1Q9Y2X7 761 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 CHD2O14647 1828 aaKnown RBP4.22□□□□□ -1.73
CSDE1-208ENST00000524652 ARHGAP23Q9P227 1491 aa4.22□□□□□ -1.73
CSDE1-208ENST00000524652 WDR33Q9C0J8 1336 aaKnown RBP4.21□□□□□ -1.73
CSDE1-208ENST00000524652 ZFYVE9O95405 1425 aa4.21□□□□□ -1.73
CSDE1-208ENST00000524652 UHRF1BP1Q6BDS2 1440 aa4.21□□□□□ -1.73
CSDE1-208ENST00000524652 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 OVOL3O00110 214 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 H2AFYO75367 372 aaKnown RBP4.21□□□□□ -1.74
CSDE1-208ENST00000524652 IGFALSP35858 605 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 ROM1Q03395 351 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 ADAM15Q13444 863 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 TUBA3CQ13748 450 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 ZCCHC8Q6NZY4 707 aaKnown RBP4.21□□□□□ -1.74
CSDE1-208ENST00000524652 TUBA3EQ6PEY2 450 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 DDX53Q86TM3 631 aaKnown RBP4.21□□□□□ -1.74
CSDE1-208ENST00000524652 SGMS1Q86VZ5 419 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 D2HGDHQ8N465 521 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 ERCC4Q92889 916 aaPredicted RBP4.21□□□□□ -1.74
CSDE1-208ENST00000524652 GFM2Q969S9 779 aaKnown RBP4.21□□□□□ -1.74
CSDE1-208ENST00000524652 SLC7A6OSQ96CW6 309 aaPredicted RBP4.21□□□□□ -1.74
CSDE1-208ENST00000524652 SAE1Q9UBE0 346 aaPredicted RBP4.21□□□□□ -1.74
CSDE1-208ENST00000524652 TRPM1Q7Z4N2 1603 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 ASXL1Q8IXJ9 1541 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 CCDC144AA2RUR9 1427 aa4.21□□□□□ -1.74
CSDE1-208ENST00000524652 A0A1W2PRX2 142 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 CAPN14A8MX76 684 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 ADCY7P51828 1080 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 KIF11P52732 1056 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 DGCR2P98153 550 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 SAFB2Q14151 953 aaKnown RBP eCLIP4.2□□□□□ -1.74
CSDE1-208ENST00000524652 DGKDQ16760 1214 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 FNDC3BQ53EP0 1204 aaKnown RBP4.2□□□□□ -1.74
CSDE1-208ENST00000524652 TMPRSS6Q8IU80 811 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 THEMISQ8N1K5 641 aaPredicted RBP4.2□□□□□ -1.74
CSDE1-208ENST00000524652 ANKRD35Q8N283 1001 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 CHST14Q8NCH0 376 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 OR5AN1Q8NGI8 311 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 TMEM176AQ96HP8 235 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 TRIM8Q9BZR9 551 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 SLC6A15Q9H2J7 730 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 AGO3Q9H9G7 860 aaKnown RBP4.2□□□□□ -1.74
CSDE1-208ENST00000524652 ACSS2Q9NR19 701 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 DENND2AQ9ULE3 1009 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 KIAA1210Q9ULL0 1709 aa4.2□□□□□ -1.74
CSDE1-208ENST00000524652 SETBP1Q9Y6X0 1596 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 NRXN1Q9ULB1 1477 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 KNDC1Q76NI1 1749 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 ARHGEF28Q8N1W1 1705 aaKnown RBP4.19□□□□□ -1.74
CSDE1-208ENST00000524652 UBA6A0AVT1 1052 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-208ENST00000524652 M0R2C6 588 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 GLRX3O76003 335 aaKnown RBP4.19□□□□□ -1.74
CSDE1-208ENST00000524652 ASLP04424 464 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 CYP17A1P05093 508 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 MAKP20794 623 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 RGS3P49796 1198 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 SLC6A3Q01959 620 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 DPTQ07507 201 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 GAGE13Q4V321 117 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 SPTY2D1Q68D10 685 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-208ENST00000524652 NME9Q86XW9 330 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 GCDHQ92947 438 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-208ENST00000524652 NKD2Q969F2 451 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-208ENST00000524652 MIEF2Q96C03 454 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 MAML3Q96JK9 1138 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 PCIF1Q9H4Z3 704 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 SLC52A1Q9NWF4 448 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 PARPBPQ9NWS1 579 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 KCMF1Q9P0J7 381 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 SAMD15Q9P1V8 674 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 CEP72Q9P209 647 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 SH3BP1Q9Y3L3 701 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 RIMS2Q9UQ26 1411 aa4.19□□□□□ -1.74
CSDE1-208ENST00000524652 MED14O60244 1454 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 MYOM2P54296 1465 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 XRN1Q8IZH2 1706 aaKnown RBP4.18□□□□□ -1.74
CSDE1-208ENST00000524652 LAMC1P11047 1609 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 TMEM2Q9UHN6 1383 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 ALKQ9UM73 1620 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 DVL2O14641 736 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 KRT37O76014 449 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 PEX11BO96011 259 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 ADH4P08319 380 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 HSPA1LP34931 641 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 ADAM8P78325 824 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 ATP2C1P98194 919 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-208ENST00000524652 CRHR2Q13324 411 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 TCIRG1Q13488 830 aa4.18□□□□□ -1.74
CSDE1-208ENST00000524652 RRP1BQ14684 758 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms