RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 COL20A1Q9P218 1284 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 FBXL5Q9UKA1 691 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 ZNF232Q9UNY5 417 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 PLAGL2Q9UPG8 496 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 PPP2R2CQ9Y2T4 447 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 SLC45A1Q9Y2W3 748 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 PCDHA10Q9Y5I2 948 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 DOCK1Q14185 1865 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 PHLPP2Q6ZVD8 1323 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 ARHGEF35A5YM69 484 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 TRIM49BA6NDI0 452 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 H0YCG3 227 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 TRAF5O00463 557 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 DKK1O94907 266 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 FAM13AO94988 1023 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 ATG7O95352 703 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 SSBP05455 408 aaKnown RBP eCLIP8.27□□□□□ -1.09
CTR9-202ENST00000524523 ATP4AP20648 1035 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 RFX1P22670 979 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 ANXA13P27216 316 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 NOS2P35228 1153 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 KRT9P35527 623 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 ADKP55263 362 aaKnown RBP8.27□□□□□ -1.09
CTR9-202ENST00000524523 KRT83P78385 493 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 STXBP2Q15833 593 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 CRTC2Q53ET0 693 aaPredicted RBP8.27□□□□□ -1.09
CTR9-202ENST00000524523 TBCELQ5QJ74 424 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 LDLRAD1Q5T700 205 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 FIGNL1Q6PIW4 674 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 MTERF4Q7Z6M4 381 aaKnown RBP8.27□□□□□ -1.09
CTR9-202ENST00000524523 REXO1L1PQ8IX06 675 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 C12orf56Q8IXR9 622 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 EXOC8Q8IYI6 725 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 TSEN2Q8NCE0 465 aaKnown RBP8.27□□□□□ -1.09
CTR9-202ENST00000524523 SHCBP1Q8NEM2 672 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 ATP6V0A1Q93050 837 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 HVCN1Q96D96 273 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 PPP1R13BQ96KQ4 1090 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 DRC1Q96MC2 740 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 MOV10L1Q9BXT6 1211 aaKnown RBP8.27□□□□□ -1.09
CTR9-202ENST00000524523 TMEM206Q9H813 350 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 ABHD10Q9NUJ1 306 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 TAB2Q9NYJ8 693 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 RGL1Q9NZL6 768 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.27□□□□□ -1.09
CTR9-202ENST00000524523 R3HCC1Q9Y3T6 440 aaKnown RBP8.27□□□□□ -1.09
CTR9-202ENST00000524523 SSC5DA1L4H1 1573 aa8.27□□□□□ -1.09
CTR9-202ENST00000524523 TTC26A0AVF1 554 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 SERTM1A2A2V5 107 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 PMM2O15305 246 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 PSAPP07602 524 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 TRIM21P19474 475 aaKnown RBP8.26□□□□□ -1.09
CTR9-202ENST00000524523 MX2P20592 715 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 EDNRBP24530 442 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 EPHX2P34913 555 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 CYLC1P35663 651 aaPredicted RBP8.26□□□□□ -1.09
CTR9-202ENST00000524523 FXR1P51114 621 aaKnown RBP eCLIP8.26□□□□□ -1.09
CTR9-202ENST00000524523 PSMA6P60900 246 aaKnown RBP8.26□□□□□ -1.09
CTR9-202ENST00000524523 PPP2R5AQ15172 486 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 NSMFQ6X4W1 530 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 HS2ST1Q7LGA3 356 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 NLRP8Q86W28 1048 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 ANKMY2Q8IV38 441 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 UBE2Q2Q8WVN8 375 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 KIFAP3Q92845 792 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 GJA10Q969M2 543 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 HINFPQ9BQA5 517 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 LXNQ9BS40 222 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 TSPAN10Q9H1Z9 355 aaPredicted RBP8.26□□□□□ -1.09
CTR9-202ENST00000524523 MRPL44Q9H9J2 332 aaKnown RBP8.26□□□□□ -1.09
CTR9-202ENST00000524523 L2HGDHQ9H9P8 463 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 PLCB1Q9NQ66 1216 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 DMAC2Q9NW81 257 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 ARMCX3Q9UH62 379 aaPredicted RBP8.26□□□□□ -1.09
CTR9-202ENST00000524523 AGTPBP1Q9UPW5 1226 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 SIK3Q9Y2K2 1263 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 RIPK3Q9Y572 518 aa8.26□□□□□ -1.09
CTR9-202ENST00000524523 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.26□□□□□ -1.09
CTR9-202ENST00000524523 BZW2Q9Y6E2 419 aaKnown RBP8.26□□□□□ -1.09
CTR9-202ENST00000524523 ATAD5Q96QE3 1844 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 A0A1W2PNR3 127 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 SSU72P8A0A1W2PR75 194 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 P4HA2O15460 535 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 CTIFO43310 598 aaKnown RBP8.25□□□□□ -1.09
CTR9-202ENST00000524523 IPO7O95373 1038 aaKnown RBP8.25□□□□□ -1.09
CTR9-202ENST00000524523 THBS1P07996 1170 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 PLS3P13797 630 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 YBX3P16989 372 aaKnown RBP eCLIP8.25□□□□□ -1.09
CTR9-202ENST00000524523 YWHABP31946 246 aaKnown RBP8.25□□□□□ -1.09
CTR9-202ENST00000524523 PSMC2P35998 433 aaKnown RBP8.25□□□□□ -1.09
CTR9-202ENST00000524523 RARRES1P49788 294 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 IRX3P78415 501 aaPredicted RBP8.25□□□□□ -1.09
CTR9-202ENST00000524523 CYP4A11Q02928 519 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 ITGB3BPQ13352 177 aaPredicted RBP8.25□□□□□ -1.09
CTR9-202ENST00000524523 CTTNQ14247 550 aaKnown RBP8.25□□□□□ -1.09
CTR9-202ENST00000524523 HSP90AA4PQ58FG1 418 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 TRIM65Q6PJ69 517 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 SFR1Q86XK3 245 aa8.25□□□□□ -1.09
CTR9-202ENST00000524523 FAM178BQ8IXR5 827 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms