RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.54	□□□□□ -1.52
PCM1-223	ENST00000524356	PRKAG3	Q9UGI9	489 aa		5.54	□□□□□ -1.52
PCM1-223	ENST00000524356	STRIP2	Q9ULQ0	834 aa		5.54	□□□□□ -1.52
PCM1-223	ENST00000524356	SCAPER	Q9BY12	1400 aa		5.54	□□□□□ -1.52
PCM1-223	ENST00000524356	FAM47E-STBD1	D6RA91	191 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	GPR85	P60893	370 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	ADAM8	P78325	824 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	FAM50A	Q14320	339 aa	Known RBP	5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	NTRK3	Q16288	839 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	BRDT	Q58F21	947 aa	Predicted RBP	5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	GRAMD4	Q6IC98	578 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	CCSAP	Q6IQ19	270 aa	Predicted RBP	5.53	□□□□□ -1.52
PCM1-223	ENST00000524356		Q6YL49	198 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	C11orf96	Q7Z7L8	435 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	WDR75	Q8IWA0	830 aa	Known RBP	5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	NME8	Q8N427	588 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	C9orf106	Q8NAJ2	232 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	DCAF4	Q8WV16	495 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	SLC39A13	Q96H72	371 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	UCKL1	Q9NWZ5	548 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	FRMD4B	Q9Y2L6	1034 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	POGZ	Q7Z3K3	1410 aa		5.53	□□□□□ -1.52
PCM1-223	ENST00000524356	FANCA	O15360	1455 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	ATP10A	O60312	1499 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	HMGB1P1	B2RPK0	211 aa	Predicted RBP	5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	MAN2B1	O00754	1011 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	C4BPA	P04003	597 aa	Known RBP	5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	POU3F3	P20264	500 aa	Predicted RBP	5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	EXOSC10	Q01780	885 aa	Known RBP	5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	FAM111B	Q6SJ93	734 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	C16orf86	Q6ZW13	317 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	NLGN4X	Q8N0W4	816 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	ZFYVE21	Q9BQ24	234 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	MAF1	Q9H063	256 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	TES	Q9UGI8	421 aa	Known RBP	5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	PNMA2	Q9UL42	364 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	LAS1L	Q9Y4W2	734 aa	Known RBP	5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	ARHGEF40	Q8TER5	1519 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	ARHGEF12	Q9NZN5	1544 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	HECW1	Q76N89	1606 aa		5.52	□□□□□ -1.53
PCM1-223	ENST00000524356	NUP153	P49790	1475 aa	Known RBP	5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	UHRF1BP1	Q6BDS2	1440 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	SMAD7	O15105	426 aa	Known RBP	5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	MAFG	O15525	162 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	KCNQ2	O43526	872 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	TYRP1	P17643	537 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	LONRF3	Q496Y0	759 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	LARP1B	Q659C4	914 aa	Known RBP	5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	KRT26	Q7Z3Y9	468 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	SCARB1	Q8WTV0	552 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	CCDC113	Q9H0I3	377 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	TCEAL9	Q9UHQ7	104 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	COL11A2	P13942	1736 aa	Predicted RBP	5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	RICTOR	Q6R327	1708 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	GOLGA3	Q08378	1498 aa		5.51	□□□□□ -1.53
PCM1-223	ENST00000524356	TTC37	Q6PGP7	1564 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	NCOA1	Q15788	1441 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	ZFYVE16	Q7Z3T8	1539 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	SETD1B	Q9UPS6	1966 aa	Known RBP	5.5	□□□□□ -1.53
PCM1-223	ENST00000524356		A0A0U1RQG5	324 aa	Predicted RBP	5.5	□□□□□ -1.53
PCM1-223	ENST00000524356		A0A1W2PQU0	124 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	GOLGA6L6	A8MZA4	724 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	PTH2R	P49190	550 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	DDR2	Q16832	855 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	C2orf27A	Q580R0	203 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	ARHGAP36	Q6ZRI8	547 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	CXorf67	Q86X51	503 aa	Predicted RBP	5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	RPL10L	Q96L21	214 aa	Known RBP	5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	SLC6A15	Q9H2J7	730 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	RSAD1	Q9HA92	442 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	CYP4F11	Q9HBI6	524 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	GNL3L	Q9NVN8	582 aa	Known RBP	5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	RNF7	Q9UBF6	113 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	ATP8A1	Q9Y2Q0	1164 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	ATP23	Q9Y6H3	246 aa		5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	COL3A1	P02461	1466 aa	Predicted RBP	5.5	□□□□□ -1.53
PCM1-223	ENST00000524356	POLR2A	P24928	1970 aa	Known RBP	5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	TRAPPC8	Q9Y2L5	1435 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	CENPVL1	A0A0U1RR11	272 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	UBE2QL1	A1L167	161 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	MYADML2	A6NDP7	307 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	PRAMEF25	A6NGN4	478 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	TSPAN6	O43657	245 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	AMY2A	P04746	511 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	AMY2B	P19961	511 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	HERVK_113	P62684	666 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	SET	Q01105	290 aa	Predicted RBP	5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	IFRD2	Q12894	506 aa	Predicted RBP	5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	LRRC41	Q15345	812 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	NFE2	Q16621	373 aa	Predicted RBP	5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	SLC10A6	Q3KNW5	377 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	DALRD3	Q5D0E6	543 aa	Known RBP	5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	FIGN	Q5HY92	759 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	SP5	Q6BEB4	398 aa	Predicted RBP	5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	STYK1	Q6J9G0	422 aa		5.49	□□□□□ -1.53
PCM1-223	ENST00000524356	IFNL3	Q8IZI9	196 aa		5.49	□□□□□ -1.53

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