RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 GPBP1Q86WP2 473 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 PRIMPOLQ96LW4 560 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 REEP2Q9BRK0 252 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 PANK2Q9BZ23 570 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 RNF39Q9H2S5 420 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 CWH43Q9H720 699 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 C17orf75Q9HAS0 396 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 PRMT7Q9NVM4 692 aaPredicted RBP13.21□□□□□ -0.29
CLN8-207ENST00000524258 CFAP45Q9UL16 551 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 STXBP5LQ9Y2K9 1186 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 PCDHB2Q9Y5E7 798 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 CNTNAP2Q9UHC6 1331 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 MYMKA6NI61 221 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 ABLIM1O14639 778 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 INPPL1O15357 1258 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLN8-207ENST00000524258 PLS3P13797 630 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 NCLP19338 710 aaKnown RBP13.2□□□□□ -0.3
CLN8-207ENST00000524258 BMPR1AP36894 532 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 AFF1P51825 1210 aaKnown RBP13.2□□□□□ -0.3
CLN8-207ENST00000524258 PPP2R5AQ15172 486 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 EPC2Q52LR7 807 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 RRAGBQ5VZM2 374 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 RESP18Q5W5W9 173 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 EEF1DP3Q658K8 133 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 TWF2Q6IBS0 349 aaKnown RBP13.2□□□□□ -0.3
CLN8-207ENST00000524258 CDR2LQ86X02 465 aaPredicted RBP13.2□□□□□ -0.3
CLN8-207ENST00000524258 TMEM192Q8IY95 271 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 FIBCD1Q8N539 461 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 TMEM161BQ8NDZ6 487 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 ARNTL2Q8WYA1 636 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 LPPQ93052 612 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 CCDC51Q96ER9 411 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 IFT74Q96LB3 600 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 DRC1Q96MC2 740 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 TMEM117Q9H0C3 514 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 C2orf40Q9H1Z8 148 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 PDZD7Q9H5P4 517 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 TMEM134Q9H6X4 195 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 PTPRHQ9HD43 1115 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 ODF2LQ9ULJ1 636 aa13.2□□□□□ -0.3
CLN8-207ENST00000524258 PRRC2BQ5JSZ5 2229 aaKnown RBP13.2□□□□□ -0.3
CLN8-207ENST00000524258 FNDC1Q4ZHG4 1894 aaPredicted RBP13.19□□□□□ -0.3
CLN8-207ENST00000524258 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 TBKBP1A7MCY6 615 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 SLC16A4O15374 487 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 B4GALT3O60512 393 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 OFD1O75665 1012 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 PRKCBP05771 671 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 RAB27AP51159 221 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 EFNA5P52803 228 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 NCKAP1LP55160 1127 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 BTG3Q14201 252 aaPredicted RBP13.19□□□□□ -0.3
CLN8-207ENST00000524258 DHX8Q14562 1220 aaKnown RBP13.19□□□□□ -0.3
CLN8-207ENST00000524258 PAN2Q504Q3 1202 aaKnown RBP13.19□□□□□ -0.3
CLN8-207ENST00000524258 NOTUMQ6P988 496 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 DEPTORQ8TB45 409 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 SAMD11Q96NU1 681 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 TYW1Q9NV66 732 aaKnown RBP13.19□□□□□ -0.3
CLN8-207ENST00000524258 KBTBD4Q9NVX7 518 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 CCDC39Q9UFE4 941 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 LRFN2Q9ULH4 789 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 MYO7AQ13402 2215 aa13.19□□□□□ -0.3
CLN8-207ENST00000524258 FRMD3A2A2Y4 597 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 H3BNC9 293 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 ERLIN2O94905 339 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 MAPTP10636 758 aaKnown RBP13.18□□□□□ -0.3
CLN8-207ENST00000524258 SKIP12755 728 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 PROZP22891 400 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 NUCB2P80303 420 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 CAMK1Q14012 370 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 MAPK6Q16659 721 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 ZBTB8OSQ8IWT0 167 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 PDILTQ8N807 584 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 GSTCDQ8NEC7 633 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 HELQQ8TDG4 1101 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 GDPD5Q8WTR4 605 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 DDX12PQ92771 950 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 ACO2Q99798 780 aaKnown RBP13.18□□□□□ -0.3
CLN8-207ENST00000524258 STRA6Q9BX79 667 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 KMT5AQ9NQR1 393 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
CLN8-207ENST00000524258 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 HPSEQ9Y251 543 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
CLN8-207ENST00000524258 HES2Q9Y543 173 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 IPPQ9Y573 584 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 MTCH2Q9Y6C9 303 aa13.18□□□□□ -0.3
CLN8-207ENST00000524258 CCDC169A6NNP5 214 aa13.17□□□□□ -0.3
CLN8-207ENST00000524258 K7ERI5 159 aa13.17□□□□□ -0.3
CLN8-207ENST00000524258 HOXA2O43364 376 aa13.17□□□□□ -0.3
CLN8-207ENST00000524258 RB1P06400 928 aa13.17□□□□□ -0.3
CLN8-207ENST00000524258 IBSPP21815 317 aaPredicted RBP13.17□□□□□ -0.3
CLN8-207ENST00000524258 CMA1P23946 247 aa13.17□□□□□ -0.3
CLN8-207ENST00000524258 TXLNAP40222 546 aa13.17□□□□□ -0.3
CLN8-207ENST00000524258 ME1P48163 572 aa13.17□□□□□ -0.3
CLN8-207ENST00000524258 KRT85P78386 507 aa13.17□□□□□ -0.3
CLN8-207ENST00000524258 DMP1Q13316 513 aaPredicted RBP13.17□□□□□ -0.3
CLN8-207ENST00000524258 PRPF4BQ13523 1007 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms