RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 KIF9Q9HAQ2 790 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 SAMSN1Q9NSI8 373 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 PRR12Q9ULL5 1215 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 TMX2Q9Y320 296 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 MAD1L1Q9Y6D9 718 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 PVALEFA0A1B0GWK0 134 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 MAP3K13O43283 966 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 SLC37A4O43826 429 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 ABL1P00519 1130 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 GSTA1P08263 222 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 GSTA2P09210 222 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 PLA2G4BP0C869 781 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 STAG3L1P0CL83 205 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 OAS2P29728 719 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 PPARGP37231 505 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 STAT1P42224 750 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 SARSP49591 514 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 PRMT2P55345 433 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 OCA2Q04671 838 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 ZKSCAN8Q15776 578 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 MMEL1Q495T6 779 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 CASC4Q6P4E1 433 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 RPAINQ86UA6 219 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 TRIM50Q86XT4 487 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 CCDC13Q8IYE1 715 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 PGBD3Q8N328 593 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 C17orf53Q8N3J3 647 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 PCSK9Q8NBP7 692 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 GIMAP8Q8ND71 665 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 CXorf38Q8TB03 319 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 C7orf43Q8WVR3 580 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 CEP19Q96LK0 163 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 CAPS2Q9BXY5 557 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 SLC39A2Q9NP94 309 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 ENTPD7Q9NQZ7 604 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 ZNF212Q9UDV6 495 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 ZNF233A6NK53 670 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 RHOBTB3O94955 611 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 OATP04181 439 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 ATP1A3P13637 1013 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 GAP43P17677 238 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 CCNE1P24864 410 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 CASP1P29466 404 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 MAPK4P31152 587 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 GCLCP48506 637 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 PRELPP51888 382 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 ARPP19P56211 112 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 SOX10P56693 466 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 FKBP1BP68106 108 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 MAP3K10Q02779 954 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 FMR1Q06787 632 aaKnown RBP eCLIP2.77□□□□□ -1.971e-9■■■■□ 21.1
PCM1-222ENST00000524226 SFSWAPQ12872 951 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 LRMPQ12912 555 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 E2F4Q16254 413 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 TYW1BQ6NUM6 668 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 ARHGEF18Q6ZSZ5 1173 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 USP49Q70CQ1 688 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 CTU1Q7Z7A3 348 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 ST13P4Q8IZP2 240 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 CCDC197Q8NCU1 140 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 BANK1Q8NDB2 785 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 ZFP91Q96JP5 570 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 CNOT6LQ96LI5 555 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 GLT1D1Q96MS3 346 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 IFIH1Q9BYX4 1025 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 UPF3AQ9H1J1 476 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 KCNF1Q9H3M0 494 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 DONSONQ9NYP3 566 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 PCDHB13Q9Y5F0 798 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 CAPN7Q9Y6W3 813 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 LTBP1Q14766 1721 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 A0A087X0B3 334 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 TMEM247A6NEH6 219 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 HNRNPCL2B2RXH8 293 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 PPP1R3GB7ZBB8 358 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 DDX39AO00148 427 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 WNT10BO00744 389 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 AP5Z1O43299 807 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 HNRNPCL1O60812 293 aaKnown RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 ATP5HO75947 161 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 DDNO94850 711 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 SUPT20HL2P0C7V6 817 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 ZFXP17010 805 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 KRT9P35527 623 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 PRCPP42785 496 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 GOLGA8FQ08AF8 430 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 GOLGA8DPQ0D2H9 430 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 MTMR2Q13614 643 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 TTLL4Q14679 1199 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 E2F5Q15329 346 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 NPY5RQ15761 445 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 LONRF2Q1L5Z9 754 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 CCDC144BQ3MJ40 725 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 HERC4Q5GLZ8 1057 aaPredicted RBP2.77□□□□□ -1.97
PCM1-222ENST00000524226 SH3BP5LQ7L8J4 393 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 SAMD7Q7Z3H4 446 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 SH3RF1Q7Z6J0 888 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 TPH2Q8IWU9 490 aa2.77□□□□□ -1.97
PCM1-222ENST00000524226 KIRREL3Q8IZU9 778 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms