RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 LOXHD1Q8IVV2 1947 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 NR3C2P08235 984 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 ITGA4P13612 1032 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 USP8P40818 1118 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 GPATCH11Q8N954 259 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 BSNDQ8WZ55 320 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 RUBCNQ92622 972 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 ZNF862O60290 1169 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 MAPTP10636 758 aaKnown RBP16.02■□□□□ 0.16
CHMP7-210ENST00000523091 PTPRAP18433 802 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 MYBPC2Q14324 1141 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 SWT1Q5T5J6 900 aaKnown RBP16.02■□□□□ 0.16
CHMP7-210ENST00000523091 ZNF746Q6NUN9 644 aaPredicted RBP16.02■□□□□ 0.16
CHMP7-210ENST00000523091 CCDC127Q96BQ5 260 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 FAM84AQ96KN4 292 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 TMEM117Q9H0C3 514 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 MAP3K20Q9NYL2 800 aaKnown RBP16.02■□□□□ 0.16
CHMP7-210ENST00000523091 GABBR1Q9UBS5 961 aa16.02■□□□□ 0.16
CHMP7-210ENST00000523091 NOC2LQ9Y3T9 749 aaKnown RBP16.02■□□□□ 0.16
CHMP7-210ENST00000523091 A0A0A6YYK5 440 aaPredicted RBP16.02■□□□□ 0.15
CHMP7-210ENST00000523091 RGS20O76081 388 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 NPTX2P47972 431 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 NCKAP1LP55160 1127 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 MAP2K1Q02750 393 aaPredicted RBP16.02■□□□□ 0.15
CHMP7-210ENST00000523091 EPC2Q52LR7 807 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 VSIG10LQ86VR7 867 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 SCYL3Q8IZE3 742 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 ZNF280CQ8ND82 737 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 SCFD2Q8WU76 684 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 PBKQ96KB5 322 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 DDX47Q9H0S4 455 aaKnown RBP16.02■□□□□ 0.15
CHMP7-210ENST00000523091 INTUQ9ULD6 942 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 COG5Q9UP83 839 aa16.02■□□□□ 0.15
CHMP7-210ENST00000523091 RPS12P25398 132 aaKnown RBP16.01■□□□□ 0.15
CHMP7-210ENST00000523091 TNFRSF8P28908 595 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 JAK3P52333 1124 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 KRT76Q01546 638 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 ALCAMQ13740 583 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 ANGEL2Q5VTE6 544 aaKnown RBP16.01■□□□□ 0.15
CHMP7-210ENST00000523091 EMBQ6PCB8 327 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 MMS22LQ6ZRQ5 1243 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 NLRX1Q86UT6 975 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 EFCAB13Q8IY85 973 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 TMEM161BQ8NDZ6 487 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 AFAP1L1Q8TED9 768 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 CTNNBL1Q8WYA6 563 aaPredicted RBP16.01■□□□□ 0.15
CHMP7-210ENST00000523091 AGPAT1Q99943 283 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 MOV10L1Q9BXT6 1211 aaKnown RBP16.01■□□□□ 0.15
CHMP7-210ENST00000523091 TBX20Q9UMR3 447 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 TMEM253P0C7T8 217 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 TNNC1P63316 161 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 PRKG1Q13976 671 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 KIF22Q14807 665 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 TMEM132BQ14DG7 1078 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 LRRC31Q6UY01 552 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 DDX42Q86XP3 938 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHMP7-210ENST00000523091 REPS2Q8NFH8 660 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 ACTRT1Q8TDG2 376 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 LMBR1Q8WVP7 490 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 SEMA4DQ92854 862 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 CAVIN3Q969G5 261 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 CEP170P1Q96L14 293 aa16.01■□□□□ 0.15
CHMP7-210ENST00000523091 TOPORSQ9NS56 1045 aaPredicted RBP16.01■□□□□ 0.15
CHMP7-210ENST00000523091 DENND3A2RUS2 1198 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 ANKRD65E5RJM6 399 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 CES2O00748 559 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 PEX10O60683 326 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 C12orf56Q8IXR9 622 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 RFFLQ8WZ73 363 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 HES6Q96HZ4 224 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 BUD13Q9BRD0 619 aaKnown RBP eCLIP16■□□□□ 0.157e-7■■□□□ 13.4
CHMP7-210ENST00000523091 PICK1Q9NRD5 415 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 SUCLA2Q9P2R7 463 aaPredicted RBP16■□□□□ 0.15
CHMP7-210ENST00000523091 ZNF214Q9UL59 606 aaPredicted RBP16■□□□□ 0.15
CHMP7-210ENST00000523091 USP20Q9Y2K6 914 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 PCDHA10Q9Y5I2 948 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 COL11A1P12107 1806 aaPredicted RBP16■□□□□ 0.15
CHMP7-210ENST00000523091 PGRMC1O00264 195 aaKnown RBP16■□□□□ 0.15
CHMP7-210ENST00000523091 CLGNO14967 610 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 SGPL1O95470 568 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 CNGA1P29973 690 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 CCND2P30279 289 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 SFNP31947 248 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 MXI1P50539 228 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 ERVK-9P63128 1117 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 PPATQ06203 517 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 SNRNP35Q16560 246 aaKnown RBP16■□□□□ 0.15
CHMP7-210ENST00000523091 NAA35Q5VZE5 725 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 SWSAP1Q6NVH7 229 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 CCDC91Q7Z6B0 441 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 ARL8AQ96BM9 186 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 ZIM3Q96PE6 472 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 AMFRQ9UKV5 643 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 NR2E1Q9Y466 385 aa16■□□□□ 0.15
CHMP7-210ENST00000523091 NCANO14594 1321 aa15.99■□□□□ 0.15
CHMP7-210ENST00000523091 PFASO15067 1338 aa15.99■□□□□ 0.15
CHMP7-210ENST00000523091 DOCK5Q9H7D0 1870 aa15.99■□□□□ 0.15
CHMP7-210ENST00000523091 KRIT1O00522 736 aa15.99■□□□□ 0.15
CHMP7-210ENST00000523091 SART1O43290 800 aaKnown RBP15.99■□□□□ 0.15
CHMP7-210ENST00000523091 KCNA2P16389 499 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms