RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 WRAP73Q9P2S5 460 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 TRAF3IP3Q9Y228 551 aa7.55□□□□□ -1.2
CSMD1-211ENST00000523062 R3HCC1Q9Y3T6 440 aaKnown RBP7.55□□□□□ -1.2
CSMD1-211ENST00000523062 NFASCO94856 1347 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 A0A1W2PQJ5 194 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 UNCXA6NJT0 531 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 USP27XA6NNY8 438 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 RSPH10B2B2RC85 870 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 PDXKO00764 312 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 CETN3O15182 167 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 BNIP3LO60238 219 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 GCNT3O95395 438 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 SLC25A27O95847 323 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 CCNE2O96020 404 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 RSPH10BP0C881 870 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 MYBP10242 640 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 RPL13P26373 211 aaKnown RBP7.54□□□□□ -1.2
CSMD1-211ENST00000523062 KRT9P35527 623 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 PHKA2P46019 1235 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 SCTRP47872 440 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 FXR1P51114 621 aaKnown RBP eCLIP7.54□□□□□ -1.2
CSMD1-211ENST00000523062 CASP5P51878 434 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 HERVK_113P62684 666 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 PPP2R3AQ06190 1150 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 SNAPC2Q13487 334 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 ALCAMQ13740 583 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 SYCP1Q15431 976 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 VWA3BQ502W6 1294 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 FIGNQ5HY92 759 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 LDLRAD1Q5T700 205 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 CEP135Q66GS9 1140 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 MOB2Q70IA6 237 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 TMTC1Q8IUR5 882 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 C4orf19Q8IY42 314 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 ANKRD35Q8N283 1001 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 MYCT1Q8N699 235 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 GTF3C2Q8WUA4 911 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-211ENST00000523062 CPLX3Q8WVH0 158 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 ATP6V0A1Q93050 837 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 OPTNQ96CV9 577 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 MOV10L1Q9BXT6 1211 aaKnown RBP7.54□□□□□ -1.2
CSMD1-211ENST00000523062 KRTAP4-7Q9BYR0 210 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 SPATC1LQ9H0A9 340 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 ASCC2Q9H1I8 757 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-211ENST00000523062 NDST4Q9H3R1 872 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 JPH1Q9HDC5 661 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-211ENST00000523062 ANKEF1Q9NU02 776 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 ABHD10Q9NUJ1 306 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 TYW1Q9NV66 732 aaKnown RBP7.54□□□□□ -1.2
CSMD1-211ENST00000523062 TRMT1Q9NXH9 659 aaKnown RBP7.54□□□□□ -1.2
CSMD1-211ENST00000523062 BTBD7Q9P203 1132 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 FAM184BQ9ULE4 1060 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 LUC7L2Q9Y383 392 aaKnown RBP7.54□□□□□ -1.2
CSMD1-211ENST00000523062 PCDHA10Q9Y5I2 948 aa7.54□□□□□ -1.2
CSMD1-211ENST00000523062 ZBTB39O15060 712 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 SLC16A3O15427 465 aaKnown RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 USO1O60763 962 aaKnown RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 ATP9AO75110 1047 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 HIP1RO75146 1068 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 EIF3JO75822 258 aaKnown RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 CNMDO75829 334 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 PRPF6O94906 941 aaKnown RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 PSAPP07602 524 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 MAPTP10636 758 aaKnown RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 KCNA2P16389 499 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 TRIM21P19474 475 aaKnown RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 NR2F2P24468 414 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 YWHABP31946 246 aaKnown RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 ICAM3P32942 547 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 RARRES1P49788 294 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 ALDH5A1P51649 535 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 CENPCQ03188 943 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 MAPK7Q13164 816 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 ADAM9Q13443 819 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 MOGSQ13724 837 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 STXBP2Q15833 593 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 NFIL3Q16649 462 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 UGCGQ16739 394 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 ODR4Q5SWX8 454 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 CYP26C1Q6V0L0 522 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 NCAPG2Q86XI2 1143 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 FAM178BQ8IXR5 827 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 OR8K1Q8NGG5 319 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 GOLGA5Q8TBA6 731 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 TRIM11Q96F44 468 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 EEF2KMTQ96G04 330 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 PCMTD1Q96MG8 357 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 MPHOSPH6Q99547 160 aaKnown RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 DNAJC7Q99615 494 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 PAGR1Q9BTK6 254 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 TTYH3Q9C0H2 523 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 RUBCNLQ9H714 662 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 ZNHIT6Q9NWK9 470 aaKnown RBP7.53□□□□□ -1.2
CSMD1-211ENST00000523062 SLC9A2Q9UBY0 812 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 CAPN11Q9UMQ6 739 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 PPP2R2CQ9Y2T4 447 aa7.53□□□□□ -1.2
CSMD1-211ENST00000523062 ASTN1O14525 1302 aa7.52□□□□□ -1.2
CSMD1-211ENST00000523062 ZMYM2Q9UBW7 1377 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 TTC26A0AVF1 554 aa7.52□□□□□ -1.21
CSMD1-211ENST00000523062 SOWAHDA6NJG2 315 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms