RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 NTRK3Q16288 839 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 FOXD4L6Q3SYB3 417 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-216ENST00000521918 PCNX4Q63HM2 1172 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 BLOC1S2Q6QNY1 142 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 FOXD4L3Q6VB84 417 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-216ENST00000521918 TEX2Q8IWB9 1127 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 ZNF713Q8N859 430 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-216ENST00000521918 KLHL23Q8NBE8 558 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 PPTC7Q8NI37 304 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 AFG1LQ8WV93 481 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 KAT2BQ92831 832 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 BADQ92934 168 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 VWCEQ96DN2 955 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 CTAGE1Q96RT6 745 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 SEZ6LQ9BYH1 1024 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 TM6SF1Q9BZW5 370 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 ALDH8A1Q9H2A2 487 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-216ENST00000521918 SOX17Q9H6I2 414 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-216ENST00000521918 OSGEPQ9NPF4 335 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 PRDM5Q9NQX1 630 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-216ENST00000521918 UNC80Q8N2C7 3258 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 TRANK1O15050 2925 aa6.79□□□□□ -1.32
SPIDR-216ENST00000521918 UMODL1Q5DID0 1318 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 VCANP13611 3396 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 STXBP3O00186 592 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 HAS3O00219 553 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 ADAMTS3O15072 1205 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 ADAM11O75078 769 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 STAM2O75886 525 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 F2P00734 622 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 TIMP1P01033 207 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 MYL3P08590 195 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 TGFB3P10600 412 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 MYCLP12524 364 aaPredicted RBP6.78□□□□□ -1.32
SPIDR-216ENST00000521918 SELPP16109 830 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 PSMA5P28066 241 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 PDIA3P30101 505 aaKnown RBP6.78□□□□□ -1.32
SPIDR-216ENST00000521918 HOXC8P31273 242 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 METAP2P50579 478 aaKnown RBP eCLIP6.78□□□□□ -1.32
SPIDR-216ENST00000521918 MRPL58Q14197 206 aaKnown RBP6.78□□□□□ -1.32
SPIDR-216ENST00000521918 PKN1Q16512 942 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 UBE2SQ16763 222 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 PLA2G4EQ3MJ16 856 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 HSDL1Q3SXM5 330 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 C9orf50Q5SZB4 431 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 CELF3Q5SZQ8 465 aaKnown RBP6.78□□□□□ -1.32
SPIDR-216ENST00000521918 MFSD5Q6N075 450 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 FAM117BQ6P1L5 589 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 XRRA1Q6P2D8 792 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 NFRKBQ6P4R8 1299 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 SHISA2Q6UWI4 295 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 RUFY3Q7L099 469 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 C16orf59Q7L2K0 433 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 HEATR3Q7Z4Q2 680 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 SESTD1Q86VW0 696 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 SLC7A3Q8WY07 619 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 KLHDC7BQ96G42 594 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 MTG1Q9BT17 334 aaPredicted RBP6.78□□□□□ -1.32
SPIDR-216ENST00000521918 NOC4LQ9BVI4 516 aaKnown RBP6.78□□□□□ -1.32
SPIDR-216ENST00000521918 NRSN2Q9GZP1 204 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 TRPV6Q9H1D0 765 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 WNT8AQ9H1J5 351 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 BCAS3Q9H6U6 928 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 PSTPIP2Q9H939 334 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 RIC8AQ9NPQ8 531 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 TRMT13Q9NUP7 481 aaKnown RBP6.78□□□□□ -1.32
SPIDR-216ENST00000521918 TMEM39AQ9NV64 488 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 BARHL2Q9NY43 387 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 KCNK4Q9NYG8 393 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 PRKAG2Q9UGJ0 569 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 MRVI1Q9Y6F6 885 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 DOCK5Q9H7D0 1870 aa6.78□□□□□ -1.32
SPIDR-216ENST00000521918 ESYT2A0FGR8 921 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 FIBPO43427 364 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 SORBS3O60504 671 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 KPNA6O60684 536 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 GGPS1O95749 300 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 ZNF286BP0CG31 522 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 RAG1P15918 1043 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 IFNAR1P17181 557 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 ITGB5P18084 799 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 CD68P34810 354 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-216ENST00000521918 NAPAP54920 295 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 FPGSQ05932 587 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 PTPN11Q06124 597 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-216ENST00000521918 RBL2Q08999 1139 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 C19orf57Q0VDD7 668 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 SHHQ15465 462 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 PFKFB3Q16875 520 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-216ENST00000521918 RASIP1Q5U651 963 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 KCNV1Q6PIU1 500 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 IGF2-ASQ6U949 168 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 SYNE3Q6ZMZ3 975 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 SMARCC2Q8TAQ2 1214 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 PPP1R13LQ8WUF5 828 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 CRYGNQ8WXF5 182 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 CUL5Q93034 780 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 GPRASP2Q96D09 838 aa6.77□□□□□ -1.33
SPIDR-216ENST00000521918 LBHD1Q9BQE6 289 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-216ENST00000521918 SENP7Q9BQF6 1050 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms