RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 NGRNQ9NPE2 291 aaKnown RBP17.29■□□□□ 0.36
USP42-207ENST00000521713 KLRK1P26718 216 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 ARHGAP18Q8N392 663 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.28■□□□□ 0.36
USP42-207ENST00000521713 KIF28PB7ZC32 967 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 KIF9Q9HAQ2 790 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 SUCLA2Q9P2R7 463 aaPredicted RBP17.28■□□□□ 0.36
USP42-207ENST00000521713 TTC36A6NLP5 189 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 STXBP3O00186 592 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 CASP1P29466 404 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 PPARDQ03181 441 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 ZNF394Q53GI3 561 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 ATG4CQ96DT6 458 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 EPS15L1Q9UBC2 864 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 PDXKO00764 312 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 ASAP2O43150 1006 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 CSPG5O95196 566 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 ZNF18P17022 549 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 FGFR2P21802 821 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 GOLGA8FQ08AF8 430 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 GOLGA8DPQ0D2H9 430 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 DARS2Q6PI48 645 aaKnown RBP17.28■□□□□ 0.36
USP42-207ENST00000521713 TMEM270Q6UE05 265 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 DNAAF3Q8N9W5 541 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 ARMC2Q8NEN0 867 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 ZMYND12Q9H0C1 365 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 RGL1Q9NZL6 768 aa17.28■□□□□ 0.36
USP42-207ENST00000521713 TRIM49BA6NDI0 452 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 PSMA2P25787 234 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 ANTXR2P58335 489 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 SCN4BQ8IWT1 228 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 RUBCNQ92622 972 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 SPECC1L-ADORA2AF8WAN1 911 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 CCDC188H7C350 402 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 PRKCBP05771 671 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 RWDD2BP57060 319 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 CXCL9Q07325 125 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 TAB3Q8N5C8 712 aaPredicted RBP17.27■□□□□ 0.36
USP42-207ENST00000521713 SH3GL3Q99963 347 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 RFC5P40937 340 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 SHC4Q6S5L8 630 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 MXRA8Q9BRK3 442 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 EHD4Q9H223 541 aa17.27■□□□□ 0.36
USP42-207ENST00000521713 NOC2LQ9Y3T9 749 aaKnown RBP17.27■□□□□ 0.36
USP42-207ENST00000521713 CFAP73A6NFT4 308 aa17.27■□□□□ 0.35
USP42-207ENST00000521713 EPHX2P34913 555 aa17.27■□□□□ 0.35
USP42-207ENST00000521713 DHX9Q08211 1270 aaKnown RBP17.27■□□□□ 0.35
USP42-207ENST00000521713 ACRBPQ8NEB7 543 aa17.27■□□□□ 0.35
USP42-207ENST00000521713 GOLPH3LQ9H4A5 285 aa17.27■□□□□ 0.35
USP42-207ENST00000521713 FBXO2Q9UK22 296 aaPredicted RBP17.27■□□□□ 0.35
USP42-207ENST00000521713 REREQ9P2R6 1566 aa17.27■□□□□ 0.35
USP42-207ENST00000521713 DCTN3O75935 186 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 INHBAP08476 426 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 IER5Q5VY09 327 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 SDCCAG3Q96C92 435 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 EFHD1Q9BUP0 239 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 POLD4Q9HCU8 107 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 PTPN22Q9Y2R2 807 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 MIF4GDA9UHW6 222 aaKnown RBP17.26■□□□□ 0.35
USP42-207ENST00000521713 KRT3P12035 628 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 PDE1BQ01064 536 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 CYP27A1Q02318 531 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 C2orf54Q08AI8 447 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 RPS6KA2Q15349 733 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 ACAP3Q96P50 834 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 EIF2AQ9BY44 585 aaKnown RBP17.26■□□□□ 0.35
USP42-207ENST00000521713 BATF3Q9NR55 127 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 CNOT8Q9UFF9 292 aaKnown RBP17.26■□□□□ 0.35
USP42-207ENST00000521713 STAP1Q9ULZ2 295 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 POLIQ9UNA4 740 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 SOWAHDA6NJG2 315 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 TRAPPC3O43617 180 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 IL1R1P14778 569 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 IRX1P78414 480 aaPredicted RBP17.26■□□□□ 0.35
USP42-207ENST00000521713 TFDP2Q14188 446 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 FAM133BQ5BKY9 247 aaKnown RBP17.26■□□□□ 0.35
USP42-207ENST00000521713 CAPN12Q6ZSI9 719 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 KAZALD1Q96I82 304 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 FTCDO95954 541 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 CYP2C19P33261 490 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 KCNJ6P48051 423 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 GCLCP48506 637 aaPredicted RBP17.26■□□□□ 0.35
USP42-207ENST00000521713 RDM1Q8NG50 284 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 KIF12Q96FN5 646 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 SCYL1Q96KG9 808 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 TRIM9Q9C026 710 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 ASNSD1Q9NWL6 643 aa17.26■□□□□ 0.35
USP42-207ENST00000521713 POLRMTO00411 1230 aaKnown RBP17.25■□□□□ 0.35
USP42-207ENST00000521713 MAPK13O15264 365 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 CHGBP05060 677 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 RARBP10826 455 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 VEGFAP15692 232 aaPredicted RBP17.25■□□□□ 0.35
USP42-207ENST00000521713 DYNLT1P63172 113 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 SRLQ86TD4 932 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 SAMD3Q8N6K7 520 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 PGBD4Q96DM1 585 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 STOML1Q9UBI4 398 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 NOVA2Q9UNW9 492 aaKnown RBP17.25■□□□□ 0.35
USP42-207ENST00000521713 F8W8V4 182 aa17.25■□□□□ 0.35
USP42-207ENST00000521713 CPP00450 1065 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms