RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MAP2K6P52564 334 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 ITGA1P56199 1179 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 NKX3-2P78367 333 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 CCT2P78371 535 aaKnown RBP4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 ZNF200P98182 395 aaPredicted RBP4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 NFATC3Q12968 1075 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 UAP1L1Q3KQV9 507 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 PRR31Q5SQ13 230 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 FAM83BQ5T0W9 1011 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 C10orf62Q5T681 223 aaPredicted RBP4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 PHF19Q5T6S3 580 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 TMEM200BQ69YZ2 307 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 PPP4R4Q6NUP7 873 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 ERAP2Q6P179 960 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 TMC5Q6UXY8 1006 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 CXXC5Q7LFL8 322 aaKnown RBP4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 C11orf96Q7Z7L8 435 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 B3GNT8Q7Z7M8 397 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 KRT78Q8N1N4 520 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 LILRA3Q8N6C8 439 aaPredicted RBP4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 GLB1L3Q8NCI6 653 aaPredicted RBP4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 FBXO15Q8NCQ5 510 aaPredicted RBP4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 CALML6Q8TD86 181 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 ALG3Q92685 438 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 MRGPRX4Q96LA9 322 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 NOX5Q96PH1 765 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 CGRRF1Q99675 332 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 GORASP1Q9BQQ3 440 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 B3GNT5Q9BYG0 378 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 OSBPL6Q9BZF3 934 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 NGRNQ9NPE2 291 aaKnown RBP4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 DLL4Q9NR61 685 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 USP18Q9UMW8 372 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 POLHQ9Y253 713 aa4.41□□□□□ -1.7
HMGN1P28-201ENST00000521340 ABLIM1O14639 778 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 KNG1P01042 644 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 HTR1BP28222 390 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 NKX6-1P78426 367 aaPredicted RBP4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 CD69Q07108 199 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 PICALMQ13492 652 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 MUM1L1Q5H9M0 696 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 VASNQ6EMK4 673 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 CD300LDQ6UXZ3 194 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 LDHDQ86WU2 507 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 SIAH1Q8IUQ4 282 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 IGDCC3Q8IVU1 814 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 OR5AN1Q8NGI8 311 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 KAT5Q92993 513 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 ELAC2Q9BQ52 826 aaKnown RBP4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 NOL10Q9BSC4 688 aaKnown RBP4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 SLC6A17Q9H1V8 727 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 PTPRHQ9HD43 1115 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 INTUQ9ULD6 942 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 FAM50BQ9Y247 325 aa4.4□□□□□ -1.71
HMGN1P28-201ENST00000521340 ST20-MTHFSA0A0A6YYL1 179 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 NPIPB6E9PJ23 425 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 FAM227AF5H4B4 570 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 KLHL18O94889 574 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 LY86O95711 162 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZSCAN22P10073 491 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 GAAP10253 952 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 NCAM1P13591 858 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 CTSSP25774 331 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 CDR1P51861 262 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 HK3P52790 923 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 TARDBPQ13148 414 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 DHX8Q14562 1220 aaKnown RBP4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 EIF4HQ15056 248 aaKnown RBP4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 LONRF3Q496Y0 759 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 ANO6Q4KMQ2 910 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 C4orf46Q504U0 113 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 TRIM68Q6AZZ1 485 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 ABHD15Q6UXT9 468 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 TMC6Q7Z403 805 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 STPG3Q8N7X2 389 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 PIK3C3Q8NEB9 887 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 GPR156Q8NFN8 814 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZSCAN18Q8TBC5 510 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 TMEM209Q96SK2 561 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 TACO1Q9BSH4 297 aaKnown RBP4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 GCM1Q9NP62 436 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 CD320Q9NPF0 282 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 RBM12Q9NTZ6 932 aaKnown RBP4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 ARHGAP20Q9P2F6 1191 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 MBD1Q9UIS9 605 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 MAGEL2Q9UJ55 1249 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZFP69BQ9UJL9 534 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 DBR1Q9UK59 544 aaKnown RBP4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 PCDHA13Q9Y5I0 950 aa4.39□□□□□ -1.71
HMGN1P28-201ENST00000521340 ETV2O00321 342 aaPredicted RBP4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 AMY1AP04745 511 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 MED14OSP0DP75 135 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 PIK3CBP42338 1070 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 GLRBP48167 497 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 SLC16A1P53985 500 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 FAM193AP78312 1265 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 ATP8B2P98198 1209 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms